Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema socranskii |
| Strain | subsp. paredis ATCC 35535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
704661 bp
Thymine Count
708421 bp
Guanine Count
642887 bp
Cytosine Count
675805 bp
Genome Length
2731774 bp
Protein-coding Genes
2426 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crispr-associated endoribonuclease cas2 | HMPREF1221_01577 | Not Available | Negative | 1728132 - 1728419 | 11033.5 |
| crispr-associated endonuclease cas1, subtype i-c/dvulg | HMPREF1221_01578 | Not Available | Negative | 1728435 - 1729466 | 38946.3 |
| crispr-associated protein cas4 | HMPREF1221_01579 | Not Available | Negative | 1729481 - 1730119 | 24257.9 |
| crispr-associated protein cas7/csd2, subtype i-c/dvulg | HMPREF1221_01580 | Not Available | Negative | 1730128 - 1730976 | 30938.5 |
| crispr-associated protein cas8c/csd1, subtype i-c/dvulg | HMPREF1221_01581 | Not Available | Negative | 1730982 - 1732850 | 71029.2 |
| crispr-associated protein cas5, subtype i-c/dvulg | HMPREF1221_01582 | Not Available | Negative | 1732847 - 1733530 | 26408.3 |
| crispr-associated helicase cas3 | HMPREF1221_01583 | Not Available | Negative | 1733600 - 1736074 | 92401.0 |
| hypothetical protein | HMPREF1221_01584 | Not Available | Negative | 1736182 - 1736364 | 7294.68 |
| hypothetical protein | HMPREF1221_01585 | Not Available | Negative | 1736657 - 1737685 | 37493.6 |
| hypothetical protein | HMPREF1221_01586 | Not Available | Negative | 1737762 - 1738088 | 12435.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

