Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema socranskii |
| Strain | subsp. paredis ATCC 35535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
704661 bp
Thymine Count
708421 bp
Guanine Count
642887 bp
Cytosine Count
675805 bp
Genome Length
2731774 bp
Protein-coding Genes
2426 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavocytochrome c | HMPREF1221_01334 | Not Available | Negative | 1445900 - 1447639 | 60226.1 |
| hypothetical protein | HMPREF1221_01335 | Not Available | Positive | 1448021 - 1448248 | 8222.89 |
| dna repair protein rada | HMPREF1221_01336 | Not Available | Negative | 1448301 - 1449656 | 48185.3 |
| hypothetical protein | HMPREF1221_01337 | Not Available | Negative | 1449756 - 1451072 | 47748.0 |
| rna polymerase sigma-54 factor | HMPREF1221_01338 | Not Available | Positive | 1451118 - 1452581 | 54411.9 |
| hypothetical protein | HMPREF1221_01339 | Not Available | Negative | 1452768 - 1452929 | 6126.41 |
| hypothetical protein | HMPREF1221_01340 | Not Available | Positive | 1452989 - 1453381 | 14430.2 |
| hypothetical protein | HMPREF1221_01341 | Not Available | Positive | 1453366 - 1454400 | 39108.2 |
| large conductance mechanosensitive channel protein | HMPREF1221_01342 | Not Available | Negative | 1454504 - 1454941 | 15642.3 |
| hypothetical protein | HMPREF1221_01343 | Not Available | Positive | 1455246 - 1456196 | 34023.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

