Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | CHA0 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens CHA0, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system protein tssa | PFLCHA0_RS30145 | Not Available | Positive | 6706614 - 6707633 | 36294.6 |
| type vi secretion system contractile sheath small subunit | PFLCHA0_RS30150 | Not Available | Positive | 6707715 - 6708230 | 18732.6 |
| type vi secretion system contractile sheath large subunit | PFLCHA0_RS30155 | Not Available | Positive | 6708247 - 6709740 | 55605.6 |
| hcp family type vi secretion system effector | PFLCHA0_RS30160 | Not Available | Positive | 6709859 - 6710347 | 17663.1 |
| type vi secretion system baseplate subunit tsse | PFLCHA0_RS30165 | Not Available | Positive | 6710508 - 6711023 | 18811.5 |
| type vi secretion system baseplate subunit tssf | PFLCHA0_RS30170 | Not Available | Positive | 6711020 - 6712879 | 69412.7 |
| type vi secretion system baseplate subunit tssg | PFLCHA0_RS30175 | Not Available | Positive | 6712843 - 6713895 | 39572.8 |
| type vi secretion system atpase tssh | PFLCHA0_RS30180 | Not Available | Positive | 6713888 - 6716563 | 97971.8 |
| type vi secretion system vgr family protein | PFLCHA0_RS30185 | Not Available | Positive | 6716694 - 6718631 | 72002.3 |
| dcrb-related protein | PFLCHA0_RS30190 | Not Available | Positive | 6718650 - 6719075 | 15603.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.







