Pseudomonas protegens CHA0

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas protegens CHA0 is a Gram-negative, rod-shaped bacterium that thrives as a heterotroph, utilizing organic compounds for energy. This organism is classified as an aerobe, requiring oxygen for its metabolic processes. P. protegens CHA0 is known for its mobility, facilitated by the presence of flagella, which allows it to navigate through its environment effectively. This bacterium typically exists as single cells and is adapted to a mesophilic temperature range, with an optimal growth temperature of 25°C. It possesses a unique cellular structure characterized by two membranes and a single replicon. P. protegens CHA0 is free-living, indicating it does not rely on other organisms for survival, although it has established biotic relationships with various hosts, notably Solanum tuberosum (potato plants). The ecological role of Pseudomonas protegens CHA0 is significant, particularly in agricultural contexts. Its ability to thrive in diverse habitats and its interaction with plant hosts suggest potential benefits in biocontrol and plant health. The bacterium's presence in the rhizosphere may enhance plant growth and protection against pathogens, underscoring its importance in sustainable agricultural practices. This highlights the potential of P. protegens CHA0 as a biocontrol agent in managing crop health and promoting ecological balance in agricultural systems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas protegens
StrainCHA0

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas protegens CHA0
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Solanum tuberosum
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas protegens CHA0, complete sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
mfs transporterPFLCHA0_RS00725Not AvailablePositive165741 - 16728555349.8
hlyd family secretion proteinPFLCHA0_RS00730Not AvailablePositive167300 - 16837037559.9
efflux transporter outer membrane subunitPFLCHA0_RS00735Not AvailablePositive168367 - 16984853789.2
sigma-70 family rna polymerase sigma factorPFLCHA0_RS00740Not AvailablePositive169919 - 17042819546.4
fecr domain-containing proteinPFLCHA0_RS00745Not AvailablePositive170425 - 17137834862.6
tonb-dependent siderophore receptorPFLCHA0_RS00750Not AvailablePositive171477 - 17394289323.7
nyn domain-containing proteinPFLCHA0_RS00755Not AvailableNegative173960 - 17464926042.3
duf3142 domain-containing proteinPFLCHA0_RS00760Not AvailableNegative174912 - 17567028457.2
hypothetical proteinPFLCHA0_RS00765Not AvailableNegative175640 - 17783280494.4
glycosyltransferase family 39 proteinPFLCHA0_RS00770Not AvailablePositive178164 - 17977459255.9

Displaying genes 291 – 300 of 6270 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.