Vibrio ruber DSM 16370

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio ruber DSM 16370 is a bacterial strain characterized by its single replicon, which indicates a streamlined genomic structure conducive to its ecological adaptability. The genome of this organism is captured in the accession FULE00000000.1, allowing for further study and analysis within the scientific community. Vibrio species are often found in marine environments, and their ecological roles can include participation in nutrient cycling and interaction with other marine organisms. While specific ecological interactions for Vibrio ruber DSM 16370 are not provided, members of the Vibrio genus are known for their diverse metabolic capabilities, which can influence their survival and proliferation in varying environmental conditions. The single replicon trait may suggest a potential for rapid replication under favorable conditions, which is a common characteristic of many marine bacteria. This could allow Vibrio ruber DSM 16370 to thrive in fluctuating environments, adapting to changes in nutrient availability or salinity. Understanding the genomic structure and ecological roles of strains like Vibrio ruber DSM 16370 can contribute to our overall knowledge of marine microbiology and the functions these organisms serve in aquatic ecosystems. Further research could elucidate the specific interactions and contributions of this strain to its habitat, enhancing our appreciation of microbial diversity in marine environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio ruber
StrainDSM 16370

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio ruber DSM 16370
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio ruber DSM 16370 strain CECT 7878T genome assembly, contig:

Gene Summary

Adenine Count

1245645 bp

Thymine Count

1260590 bp

Guanine Count

1061585 bp

Cytosine Count

1055177 bp

Genome Length

4622997 bp

Protein-coding Genes

3879 genes

Non-Coding Genes

151 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinVR7878_02300Not AvailablePositive2650759 - 26509898694.49
5,10-methylenetetrahydrofolate reductaseVR7878_02301Not AvailableNegative2650927 - 265181732917.1
bifunctional aspartokinase/homoserine dehydrogenase 2VR7878_02302Not AvailableNegative2652058 - 265446988783.6
cystathionine gamma-synthaseVR7878_02303Not AvailableNegative2654469 - 265563542486.6
met repressorVR7878_02304Not AvailablePositive2655851 - 265616812062.2
glutathionine s-transferaseVR7878_02305Not AvailablePositive2656333 - 265698325129.4
nadp-dependent malic enzymeVR7878_02306Not AvailableNegative2657115 - 265839246352.0
50s ribosomal protein l31VR7878_02307Not AvailableNegative2658695 - 26589168169.77
primosomal protein n'VR7878_02308Not AvailablePositive2659156 - 266137282717.1
hth-type transcriptional repressor cytrVR7878_02309Not AvailablePositive2661622 - 266262636666.4

Displaying genes 2361 – 2370 of 4030 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.