Vibrio ruber DSM 16370

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio ruber DSM 16370 is a bacterial strain characterized by its single replicon, which indicates a streamlined genomic structure conducive to its ecological adaptability. The genome of this organism is captured in the accession FULE00000000.1, allowing for further study and analysis within the scientific community. Vibrio species are often found in marine environments, and their ecological roles can include participation in nutrient cycling and interaction with other marine organisms. While specific ecological interactions for Vibrio ruber DSM 16370 are not provided, members of the Vibrio genus are known for their diverse metabolic capabilities, which can influence their survival and proliferation in varying environmental conditions. The single replicon trait may suggest a potential for rapid replication under favorable conditions, which is a common characteristic of many marine bacteria. This could allow Vibrio ruber DSM 16370 to thrive in fluctuating environments, adapting to changes in nutrient availability or salinity. Understanding the genomic structure and ecological roles of strains like Vibrio ruber DSM 16370 can contribute to our overall knowledge of marine microbiology and the functions these organisms serve in aquatic ecosystems. Further research could elucidate the specific interactions and contributions of this strain to its habitat, enhancing our appreciation of microbial diversity in marine environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio ruber
StrainDSM 16370

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio ruber DSM 16370
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio ruber DSM 16370 strain CECT 7878T genome assembly, contig:

Gene Summary

Adenine Count

1245645 bp

Thymine Count

1260590 bp

Guanine Count

1061585 bp

Cytosine Count

1055177 bp

Genome Length

4622997 bp

Protein-coding Genes

3879 genes

Non-Coding Genes

151 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
flagellin cVR7878_01035Not AvailableNegative1205072 - 120620539812.2
flagellin bVR7878_01036Not AvailableNegative1206746 - 120788540416.1
flagellar hook-associated protein 3VR7878_01037Not AvailableNegative1208319 - 120951245185.5
flagellar hook-associated protein 1VR7878_01038Not AvailableNegative1209526 - 121140069372.1
peptidoglycan hydrolase flgjVR7878_01039Not AvailableNegative1211555 - 121249334426.2
flagellar p-ring protein precursorVR7878_01040Not AvailableNegative1212504 - 121359538067.9
flagellar l-ring protein precursorVR7878_01041Not AvailableNegative1213666 - 121444827955.4
flagellar basal-body rod protein flggVR7878_01042Not AvailableNegative1214473 - 121526128003.1
flagellar basal-body rod protein flgfVR7878_01043Not AvailableNegative1215281 - 121603026605.8
flagellar hook protein flgeVR7878_01044Not AvailableNegative1216216 - 121752047009.0

Displaying genes 1121 – 1130 of 4030 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.