Vibrio cincinnatiensis DSM 19608

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio cincinnatiensis DSM 19608 is a bacterial strain characterized by having a single replicon, which is a notable trait among members of the Vibrio genus. The strain is cataloged under the accession number FUXB00000000.1, indicating its genetic sequence is available for research and analysis. As a member of the Vibrio genus, V. cincinnatiensis is likely to exhibit traits common to this group, such as its aquatic habitat preference and potential associations with marine environments. Though specific ecological roles and interactions of V. cincinnatiensis are not detailed here, the genus Vibrio is known for its diverse lifestyles, ranging from free-living forms to symbiotic and pathogenic relationships with various marine organisms. The presence of a single replicon suggests a streamlined genomic structure, which could influence the organism's adaptability and survival strategies in its ecological niche. This might also reflect a potential for efficient replication and resource utilization in marine environments, which are often subject to varying conditions. Understanding the genomic characteristics of V. cincinnatiensis, including its replicon structure, may provide insights into its evolutionary adaptations and ecological roles in aquatic ecosystems. Further research could elucidate its specific interactions within these environments and its potential effects on marine biodiversity.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio cincinnatiensis
StrainDSM 19608

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio cincinnatiensis DSM 19608
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio cincinnatiensis DSM 19608 genome assembly, contig:

Gene Summary

Adenine Count

1026818 bp

Thymine Count

1035318 bp

Guanine Count

811475 bp

Cytosine Count

790571 bp

Genome Length

3665830 bp

Protein-coding Genes

3277 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nitrite reductase (nadh) large subunitSAMN02745782_02906Not AvailablePositive3181043 - 318361993812.4
assimilatory nitrite reductase (nad(p)h) small subunitSAMN02745782_02907Not AvailablePositive3183616 - 318394212090.4
formate/nitrite transporterSAMN02745782_02908Not AvailablePositive3184054 - 318486629001.6
uroporphyrin-iii c-methyltransferaseSAMN02745782_02909Not AvailablePositive3184896 - 318566027421.1
uncharacterized conserved protein, laba/duf88 familySAMN02745782_02910Not AvailablePositive3185761 - 318623417902.5
nitrous oxide-stimulated promoterSAMN02745782_02911Not AvailablePositive3186604 - 318699315120.8
predicted arabinose efflux permease, mfs familySAMN02745782_02912Not AvailableNegative3187016 - 318817041110.7
trap transporter, dctm subunitSAMN02745782_02913Not AvailableNegative3188594 - 318986244730.9
trap-type c4-dicarboxylate transport system, small permease componentSAMN02745782_02914Not AvailableNegative3189856 - 319037119848.7
trap-type c4-dicarboxylate transport system, substrate-binding proteinSAMN02745782_02915Not AvailableNegative3190407 - 319137235931.5

Displaying genes 2871 – 2880 of 3347 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.