Vibrio cincinnatiensis DSM 19608

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio cincinnatiensis DSM 19608 is a bacterial strain characterized by having a single replicon, which is a notable trait among members of the Vibrio genus. The strain is cataloged under the accession number FUXB00000000.1, indicating its genetic sequence is available for research and analysis. As a member of the Vibrio genus, V. cincinnatiensis is likely to exhibit traits common to this group, such as its aquatic habitat preference and potential associations with marine environments. Though specific ecological roles and interactions of V. cincinnatiensis are not detailed here, the genus Vibrio is known for its diverse lifestyles, ranging from free-living forms to symbiotic and pathogenic relationships with various marine organisms. The presence of a single replicon suggests a streamlined genomic structure, which could influence the organism's adaptability and survival strategies in its ecological niche. This might also reflect a potential for efficient replication and resource utilization in marine environments, which are often subject to varying conditions. Understanding the genomic characteristics of V. cincinnatiensis, including its replicon structure, may provide insights into its evolutionary adaptations and ecological roles in aquatic ecosystems. Further research could elucidate its specific interactions within these environments and its potential effects on marine biodiversity.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio cincinnatiensis
StrainDSM 19608

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio cincinnatiensis DSM 19608
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio cincinnatiensis DSM 19608 genome assembly, contig:

Gene Summary

Adenine Count

1026818 bp

Thymine Count

1035318 bp

Guanine Count

811475 bp

Cytosine Count

790571 bp

Genome Length

3665830 bp

Protein-coding Genes

3277 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
serine hydroxymethyltransferaseSAMN02745782_02896Not AvailablePositive3173252 - 317450245234.9
hypothetical proteinSAMN02745782_02897Not AvailableNegative3174579 - 317490511857.0
lipase (class 3)SAMN02745782_02898Not AvailableNegative3175163 - 317632942199.7
hypothetical proteinSAMN02745782_02899Not AvailableNegative3176342 - 31765839642.55
homeodomain-like domain-containing proteinSAMN02745782_02900Not AvailableNegative3176584 - 317685610297.4
transcriptional regulatory protein, c terminalSAMN02745782_02901Not AvailableNegative3176906 - 317719911020.3
eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant)SAMN02745782_02902Not AvailablePositive3177629 - 317836628481.3
Trna-leuNot AvailableNot AvailablePositive3178638 - 3178724Not Available
Trna-cysNot AvailableNot AvailablePositive3178742 - 3178815Not Available
betaine/carnitine transporter, bcct familySAMN02745782_02905Not AvailableNegative3179009 - 318058957733.2

Displaying genes 2861 – 2870 of 3347 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.