Vibrio cincinnatiensis DSM 19608

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio cincinnatiensis DSM 19608 is a bacterial strain characterized by having a single replicon, which is a notable trait among members of the Vibrio genus. The strain is cataloged under the accession number FUXB00000000.1, indicating its genetic sequence is available for research and analysis. As a member of the Vibrio genus, V. cincinnatiensis is likely to exhibit traits common to this group, such as its aquatic habitat preference and potential associations with marine environments. Though specific ecological roles and interactions of V. cincinnatiensis are not detailed here, the genus Vibrio is known for its diverse lifestyles, ranging from free-living forms to symbiotic and pathogenic relationships with various marine organisms. The presence of a single replicon suggests a streamlined genomic structure, which could influence the organism's adaptability and survival strategies in its ecological niche. This might also reflect a potential for efficient replication and resource utilization in marine environments, which are often subject to varying conditions. Understanding the genomic characteristics of V. cincinnatiensis, including its replicon structure, may provide insights into its evolutionary adaptations and ecological roles in aquatic ecosystems. Further research could elucidate its specific interactions within these environments and its potential effects on marine biodiversity.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio cincinnatiensis
StrainDSM 19608

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio cincinnatiensis DSM 19608
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio cincinnatiensis DSM 19608 genome assembly, contig:

Gene Summary

Adenine Count

1026818 bp

Thymine Count

1035318 bp

Guanine Count

811475 bp

Cytosine Count

790571 bp

Genome Length

3665830 bp

Protein-coding Genes

3277 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protein of unknown functionSAMN02745782_02824Not AvailablePositive3098377 - 309891920148.1
two-component system, ntrc family, nitrogen regulation sensor histidine kinase glnlSAMN02745782_02825Not AvailablePositive3099043 - 310008938933.4
two-component system, ntrc family, nitrogen regulation response regulator glngSAMN02745782_02826Not AvailablePositive3100130 - 310153352536.1
adenosine deaminaseSAMN02745782_02827Not AvailablePositive3101667 - 310267136754.0
p-aminobenzoyl-glutamate transporter familySAMN02745782_02828Not AvailablePositive3103561 - 310512054922.2
trap transporter, dctm subunitSAMN02745782_02829Not AvailableNegative3105205 - 310650045993.0
trap-type c4-dicarboxylate transport system, small permease componentSAMN02745782_02830Not AvailableNegative3106502 - 310702620101.9
trap-type c4-dicarboxylate transport system, substrate-binding proteinSAMN02745782_02831Not AvailableNegative3107036 - 310807038032.5
oxepin-coa hydrolase / 3-oxo-5,6-dehydrosuberyl-coa semialdehyde dehydrogenaseSAMN02745782_02832Not AvailablePositive3108336 - 311038774181.2
ring-1,2-phenylacetyl-coa epoxidase subunit paaaSAMN02745782_02833Not AvailablePositive3110565 - 311149435215.7

Displaying genes 2791 – 2800 of 3347 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.