Vibrio cincinnatiensis DSM 19608

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio cincinnatiensis DSM 19608 is a bacterial strain characterized by having a single replicon, which is a notable trait among members of the Vibrio genus. The strain is cataloged under the accession number FUXB00000000.1, indicating its genetic sequence is available for research and analysis. As a member of the Vibrio genus, V. cincinnatiensis is likely to exhibit traits common to this group, such as its aquatic habitat preference and potential associations with marine environments. Though specific ecological roles and interactions of V. cincinnatiensis are not detailed here, the genus Vibrio is known for its diverse lifestyles, ranging from free-living forms to symbiotic and pathogenic relationships with various marine organisms. The presence of a single replicon suggests a streamlined genomic structure, which could influence the organism's adaptability and survival strategies in its ecological niche. This might also reflect a potential for efficient replication and resource utilization in marine environments, which are often subject to varying conditions. Understanding the genomic characteristics of V. cincinnatiensis, including its replicon structure, may provide insights into its evolutionary adaptations and ecological roles in aquatic ecosystems. Further research could elucidate its specific interactions within these environments and its potential effects on marine biodiversity.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio cincinnatiensis
StrainDSM 19608

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio cincinnatiensis DSM 19608
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio cincinnatiensis DSM 19608 genome assembly, contig:

Gene Summary

Adenine Count

1026818 bp

Thymine Count

1035318 bp

Guanine Count

811475 bp

Cytosine Count

790571 bp

Genome Length

3665830 bp

Protein-coding Genes

3277 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
outer membrane protein beta-barrel domain-containing proteinSAMN02745782_01993Not AvailablePositive2221194 - 222170618100.2
sensor c-di-gmp phosphodiesterase, contains css-motif sensor and eal domainSAMN02745782_01994Not AvailableNegative2221776 - 222330558376.5
ca2+-transporting atpaseSAMN02745782_01995Not AvailablePositive2223605 - 2226337100652.0
haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or edSAMN02745782_01996Not AvailableNegative2226361 - 222702324410.5
high affinity sulphate transporter 1SAMN02745782_01997Not AvailablePositive2227293 - 222903262798.7
glucosamine-6-phosphate deaminaseSAMN02745782_01998Not AvailableNegative2229113 - 222991329697.4
protein of unknown functionSAMN02745782_01999Not AvailablePositive2230224 - 22304759587.42
hypothetical proteinSAMN02745782_02000Not AvailableNegative2230717 - 223107613727.0
dna-binding transcriptional regulator, lysr familySAMN02745782_02001Not AvailablePositive2231295 - 223217933134.6
murein lipoproteinSAMN02745782_02002Not AvailableNegative2232240 - 22325099320.82

Displaying genes 1971 – 1980 of 3347 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.