Vibrio cincinnatiensis DSM 19608

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio cincinnatiensis DSM 19608 is a bacterial strain characterized by having a single replicon, which is a notable trait among members of the Vibrio genus. The strain is cataloged under the accession number FUXB00000000.1, indicating its genetic sequence is available for research and analysis. As a member of the Vibrio genus, V. cincinnatiensis is likely to exhibit traits common to this group, such as its aquatic habitat preference and potential associations with marine environments. Though specific ecological roles and interactions of V. cincinnatiensis are not detailed here, the genus Vibrio is known for its diverse lifestyles, ranging from free-living forms to symbiotic and pathogenic relationships with various marine organisms. The presence of a single replicon suggests a streamlined genomic structure, which could influence the organism's adaptability and survival strategies in its ecological niche. This might also reflect a potential for efficient replication and resource utilization in marine environments, which are often subject to varying conditions. Understanding the genomic characteristics of V. cincinnatiensis, including its replicon structure, may provide insights into its evolutionary adaptations and ecological roles in aquatic ecosystems. Further research could elucidate its specific interactions within these environments and its potential effects on marine biodiversity.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio cincinnatiensis
StrainDSM 19608

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio cincinnatiensis DSM 19608
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio cincinnatiensis DSM 19608 genome assembly, contig:

Gene Summary

Adenine Count

1026818 bp

Thymine Count

1035318 bp

Guanine Count

811475 bp

Cytosine Count

790571 bp

Genome Length

3665830 bp

Protein-coding Genes

3277 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-binding cassette protein, chvd familySAMN02745782_01750Not AvailableNegative1941630 - 194329762389.2
soluble lytic murein transglycosylaseSAMN02745782_01751Not AvailablePositive1943561 - 194550774992.4
trp operon repressorSAMN02745782_01752Not AvailablePositive1945562 - 194585510912.3
inosine/xanthosine triphosphataseSAMN02745782_01753Not AvailableNegative1945920 - 194647119964.8
chorismate mutaseSAMN02745782_01754Not AvailableNegative1946486 - 194766744448.7
ribosome-associated inhibitor aSAMN02745782_01756Not AvailableNegative1947910 - 194823912605.0
beta-barrel assembly machine subunit bamdSAMN02745782_01757Not AvailableNegative1948644 - 194937527911.2
23s rrna pseudouridine1911/1915/1917 synthaseSAMN02745782_01758Not AvailablePositive1949528 - 195050236670.5
conserved hypothetical proteinSAMN02745782_01759Not AvailablePositive1950505 - 195123026549.8
atp-dependent clp protease atp-binding subunit clpbSAMN02745782_01760Not AvailablePositive1951329 - 195390295974.6

Displaying genes 1731 – 1740 of 3347 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.