Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Rubellimicrobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Rubellimicrobium |
| Species | Rubellimicrobium thermophilum |
| Strain | DSM 16684 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
488384 bp
Thymine Count
485350 bp
Guanine Count
1097794 bp
Cytosine Count
1087707 bp
Genome Length
3159235 bp
Protein-coding Genes
3221 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-carboxymuconolactone decarboxylase | ruthe_02809 | Not Available | Positive | 2624518 - 2624904 | 13999.7 |
| protocatechuate 3,4-dioxygenase, beta subunit | ruthe_02810 | Not Available | Positive | 2624901 - 2625623 | 27157.4 |
| protocatechuate 3,4-dioxygenase, alpha subunit | ruthe_02811 | Not Available | Positive | 2625626 - 2626237 | 22422.7 |
| hypothetical protein | ruthe_02812 | Not Available | Positive | 2626240 - 2627079 | 30773.9 |
| 3-carboxy-cis,cis-muconate cycloisomerase | ruthe_02813 | Not Available | Positive | 2627136 - 2628419 | 44636.9 |
| 4-hydroxyphenylpyruvate dioxygenase | ruthe_02814 | Not Available | Negative | 2628431 - 2629219 | 28211.7 |
| sugar phosphate isomerase/epimerase | ruthe_02815 | Not Available | Negative | 2629161 - 2630309 | 41590.6 |
| shikimate 5-dehydrogenase | ruthe_02816 | Not Available | Negative | 2630306 - 2631151 | 29112.9 |
| uncharacterized protein putative in bacteria | ruthe_02817 | Not Available | Negative | 2631148 - 2632647 | 52748.4 |
| tripartite tricarboxylate transporter tctb family | ruthe_02818 | Not Available | Negative | 2632649 - 2633164 | 18777.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
