Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio xylanivorans |
| Strain | DSM 14809 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1044767 bp
Thymine Count
1051393 bp
Guanine Count
655959 bp
Cytosine Count
668590 bp
Genome Length
3420924 bp
Protein-coding Genes
3078 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02745725_00940 | Not Available | Positive | 1095748 - 1096434 | 27091.1 |
| exodeoxyribonuclease v alpha subunit | SAMN02745725_00941 | Not Available | Positive | 1096830 - 1099073 | 83825.9 |
| hdig domain-containing protein | SAMN02745725_00942 | Not Available | Negative | 1099054 - 1100232 | 44080.9 |
| methionine adenosyltransferase | SAMN02745725_00943 | Not Available | Positive | 1100463 - 1101644 | 42606.9 |
| hamp domain-containing protein | SAMN02745725_00944 | Not Available | Positive | 1101715 - 1102776 | 40129.6 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN02745725_00945 | Not Available | Positive | 1102769 - 1103458 | 26255.7 |
| 23s rrna pseudouridine1911/1915/1917 synthase | SAMN02745725_00946 | Not Available | Positive | 1103494 - 1104150 | 24584.1 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN02745725_00947 | Not Available | Positive | 1104173 - 1106455 | 88508.0 |
| prolyl-trna synthetase | SAMN02745725_00948 | Not Available | Positive | 1106570 - 1108009 | 54715.4 |
| trna nucleotidyltransferase (cca-adding enzyme) | SAMN02745725_00949 | Not Available | Positive | 1108011 - 1109336 | 49766.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
