Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio xylanivorans |
| Strain | DSM 14809 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1044767 bp
Thymine Count
1051393 bp
Guanine Count
655959 bp
Cytosine Count
668590 bp
Genome Length
3420924 bp
Protein-coding Genes
3078 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, lysr family | SAMN02745725_00780 | Not Available | Negative | 910181 - 911065 | 33179.9 |
| shikimate dehydrogenase | SAMN02745725_00781 | Not Available | Positive | 911315 - 912190 | 31767.4 |
| major facilitator superfamily protein | SAMN02745725_00782 | Not Available | Positive | 912230 - 913447 | 42905.9 |
| 3-dehydroquinate dehydratase | SAMN02745725_00783 | Not Available | Positive | 913472 - 914233 | 27242.8 |
| trap-type c4-dicarboxylate transport system, small permease component | SAMN02745725_00784 | Not Available | Positive | 914308 - 914937 | 24702.8 |
| c4-dicarboxylate transporter, dctm subunit | SAMN02745725_00785 | Not Available | Positive | 914934 - 916223 | 45537.1 |
| tripartite atp-independent transporter solute receptor, dctp family | SAMN02745725_00786 | Not Available | Positive | 916233 - 917237 | 37632.7 |
| rna polymerase sporulation-specific sigma factor | SAMN02745725_00787 | Not Available | Negative | 917267 - 917854 | 22115.4 |
| 23s rrna (guanosine2251-2'-o)-methyltransferase | SAMN02745725_00788 | Not Available | Negative | 917873 - 918622 | 26886.3 |
| ribonuclease-3 family protein | SAMN02745725_00789 | Not Available | Negative | 918625 - 919065 | 16399.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
