Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio xylanivorans |
| Strain | DSM 14809 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1044767 bp
Thymine Count
1051393 bp
Guanine Count
655959 bp
Cytosine Count
668590 bp
Genome Length
3420924 bp
Protein-coding Genes
3078 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) family | SAMN02745725_00048 | Not Available | Negative | 53563 - 54087 | 19931.9 |
| eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant) | SAMN02745725_00049 | Not Available | Negative | 54105 - 56030 | 73133.7 |
| branched chain amino acid aminotransferase apoenzyme | SAMN02745725_00050 | Not Available | Positive | 56220 - 57284 | 39920.1 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN02745725_00051 | Not Available | Positive | 57263 - 59896 | 98492.1 |
| glycine hydroxymethyltransferase | SAMN02745725_00052 | Not Available | Positive | 59957 - 61222 | 45898.1 |
| collagen binding domain-containing protein | SAMN02745725_00053 | Not Available | Positive | 61381 - 63726 | 85858.6 |
| sortase a | SAMN02745725_00054 | Not Available | Positive | 63686 - 64300 | 22760.5 |
| hydrogenase nickel incorporation protein hypb | SAMN02745725_00055 | Not Available | Positive | 64553 - 65227 | 24828.6 |
| nadph-dependent glutamate synthase beta chain | SAMN02745725_00056 | Not Available | Positive | 65290 - 68079 | 103199.0 |
| acetyl esterase/lipase | SAMN02745725_00057 | Not Available | Positive | 68257 - 69252 | 37959.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
