Pseudobutyrivibrio xylanivorans DSM 14809

Gram-positiveanaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Pseudobutyrivibrio

Description

Pseudobutyrivibrio xylanivorans DSM 14809 is a Gram-positive, anaerobic bacterium characterized by its ability to thrive in oxygen-free environments. This organism possesses flagella, which aids in its motility, allowing it to navigate through its natural habitats effectively. P. xylanivorans has a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability and efficiency in nutrient utilization. Its genomic information is cataloged under the accession number FQYQ00000000.1, providing a reference point for further genomic and biochemical studies. This bacterium is significant in the context of microbial ecology, particularly in the degradation of xylan, a component of plant hemicellulose. By breaking down xylan, Pseudobutyrivibrio xylanivorans plays a crucial role in the carbon cycle, facilitating the conversion of complex polysaccharides into simpler compounds that can be utilized by other microorganisms. This process not only contributes to the recycling of organic matter in anaerobic environments but also supports the overall health of microbial communities in ecosystems such as the rumen of herbivores, where it can be found. Overall, Pseudobutyrivibrio xylanivorans exemplifies the intricate relationships within anaerobic microbial ecosystems and underscores the importance of such organisms in biogeochemical processes.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusPseudobutyrivibrio
SpeciesPseudobutyrivibrio xylanivorans
StrainDSM 14809

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudobutyrivibrio xylanivorans DSM 14809 genome assembly, contig:

Gene Summary

Adenine Count

1044767 bp

Thymine Count

1051393 bp

Guanine Count

655959 bp

Cytosine Count

668590 bp

Genome Length

3420924 bp

Protein-coding Genes

3078 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
23s ribosomal rna . bacterial lsuNot AvailableNot AvailablePositive40929 - 4117618.01
carbohydrate binding module (family 6)SAMN02745725_00039Not AvailableNegative39457 - 4131665085.5
diguanylate cyclase (ggdef) domain-containing proteinSAMN02745725_00040Not AvailableNegative41597 - 4277844670.3
fist n domain-containing proteinSAMN02745725_00041Not AvailableNegative42780 - 4334320806.5
atpase components of abc transporters with duplicated atpase domainsSAMN02745725_00042Not AvailablePositive43643 - 4528361947.6
pectate lyaseSAMN02745725_00043Not AvailablePositive45435 - 4749874848.3
gtp pyrophosphokinaseSAMN02745725_00044Not AvailablePositive47798 - 5009886866.0
glyoxylase, beta-lactamase superfamily iiSAMN02745725_00045Not AvailablePositive50108 - 5073122599.9
oxygen-independent coproporphyrinogen-3 oxidaseSAMN02745725_00046Not AvailablePositive50744 - 5218354849.5
histidyl-trna synthetaseSAMN02745725_00047Not AvailablePositive52174 - 5343346953.4

Displaying genes 41 – 50 of 3139 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.