Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio xylanivorans |
| Strain | DSM 14809 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1044767 bp
Thymine Count
1051393 bp
Guanine Count
655959 bp
Cytosine Count
668590 bp
Genome Length
3420924 bp
Protein-coding Genes
3078 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component response regulator, sapr family, consists of rec, whth and btad domains | SAMN02745725_00408 | Not Available | Positive | 485653 - 486474 | 31633.6 |
| anti-sigma regulatory factor (ser/thr protein kinase) | SAMN02745725_00409 | Not Available | Positive | 486649 - 487086 | 16458.8 |
| sigma-b regulation protein rsbu (phosphoserine phosphatase) | SAMN02745725_00410 | Not Available | Positive | 487104 - 488684 | 59743.6 |
| hd domain-containing protein | SAMN02745725_00411 | Not Available | Positive | 488744 - 490912 | 81318.6 |
| signal transduction histidine kinase | SAMN02745725_00412 | Not Available | Positive | 490951 - 492921 | 74257.5 |
| hd domain-containing protein | SAMN02745725_00413 | Not Available | Positive | 492937 - 495306 | 90416.8 |
| hpt domain-containing protein | SAMN02745725_00414 | Not Available | Positive | 495383 - 496015 | 24015.7 |
| response regulator receiver domain-containing protein | SAMN02745725_00415 | Not Available | Positive | 496036 - 496713 | 25788.9 |
| hypothetical protein | SAMN02745725_00416 | Not Available | Positive | 496879 - 497805 | 33289.2 |
| dna-binding transcriptional regulator, lysr family | SAMN02745725_00417 | Not Available | Positive | 497944 - 498846 | 34559.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
