Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio xylanivorans |
| Strain | DSM 14809 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1044767 bp
Thymine Count
1051393 bp
Guanine Count
655959 bp
Cytosine Count
668590 bp
Genome Length
3420924 bp
Protein-coding Genes
3078 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polar amino acid transport system substrate-binding protein | SAMN02745725_02725 | Not Available | Positive | 3016831 - 3018336 | 54391.5 |
| polar amino acid transport system atp-binding protein | SAMN02745725_02726 | Not Available | Positive | 3018354 - 3019091 | 26942.6 |
| alanine racemase | SAMN02745725_02727 | Not Available | Positive | 3019187 - 3020356 | 43044.1 |
| inner membrane protein | SAMN02745725_02728 | Not Available | Negative | 3020464 - 3021081 | 23458.5 |
| hypothetical protein | SAMN02745725_02729 | Not Available | Negative | 3021486 - 3021698 | 7835.5 |
| helix-turn-helix domain-containing protein | SAMN02745725_02730 | Not Available | Positive | 3021888 - 3022397 | 18919.4 |
| sugar fermentation stimulation protein a | SAMN02745725_02731 | Not Available | Negative | 3022502 - 3023152 | 24323.3 |
| hypothetical protein | SAMN02745725_02732 | Not Available | Negative | 3023157 - 3023654 | 19199.9 |
| uncharacterized membrane protein ysda, duf1294 family | SAMN02745725_02733 | Not Available | Negative | 3023727 - 3023996 | 10069.9 |
| hypothetical protein | SAMN02745725_02734 | Not Available | Negative | 3024087 - 3024725 | 23493.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
