Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio xylanivorans |
| Strain | DSM 14809 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1044767 bp
Thymine Count
1051393 bp
Guanine Count
655959 bp
Cytosine Count
668590 bp
Genome Length
3420924 bp
Protein-coding Genes
3078 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polar amino acid transport system substrate-binding protein | SAMN02745725_00177 | Not Available | Positive | 207876 - 208712 | 29677.6 |
| polar amino acid transport system permease protein | SAMN02745725_00178 | Not Available | Positive | 208727 - 209383 | 24628.8 |
| polar amino acid transport system atp-binding protein | SAMN02745725_00179 | Not Available | Positive | 209393 - 210145 | 28007.5 |
| sodium/proline symporter | SAMN02745725_00180 | Not Available | Positive | 210165 - 211679 | 54044.3 |
| eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant) | SAMN02745725_00181 | Not Available | Negative | 211735 - 213633 | 73275.9 |
| putative efflux protein, mate family | SAMN02745725_00182 | Not Available | Positive | 213873 - 215243 | 49681.5 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN02745725_00183 | Not Available | Negative | 215260 - 217455 | 83328.3 |
| neurotransmitter:na+ symporter, nss family | SAMN02745725_00184 | Not Available | Positive | 217629 - 218999 | 49922.7 |
| hypothetical protein | SAMN02745725_00185 | Not Available | Positive | 219112 - 219420 | 10960.5 |
| zinc transport system substrate-binding protein | SAMN02745725_00186 | Not Available | Positive | 219496 - 220515 | 37263.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
