Prevotella intermedia ATCC 25611 = DSM 20706 str. ATCC 25611 and strain-17

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Prevotellaceae

Genus

Prevotella

Description

Prevotella intermedia ATCC 25611, also known as DSM 20706, is a Gram-negative, anaerobic bacterium characterized by its rod shape and the presence of flagella, which contribute to its motility. This strain is notable for having a single replicon, indicating a streamlined genetic organization. Its genomic data can be accessed under the accession number NZ_CP019300.1. Strain-17 of Prevotella intermedia shares similar traits, emphasizing its classification within the same species. Both strains thrive in low-oxygen environments, aligning with the typical habitat of Prevotella species, which are often found in the human oral cavity and gastrointestinal tract. These bacteria play a crucial role in the microbial ecosystem, particularly in the digestion of complex carbohydrates. The anaerobic nature of Prevotella intermedia suggests its adaptation to environments where oxygen levels are low, allowing it to outcompete aerobic organisms. Furthermore, the presence of flagella may facilitate its movement within viscous environments, such as biofilms in the oral cavity, where it can contribute to dental plaque formation and potentially influence oral health. Understanding the specific traits of Prevotella intermedia strains enhances our knowledge of their ecological roles and interactions within human microbiomes, potentially informing therapeutic strategies for managing oral and systemic health conditions associated with dysbiosis.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPrevotellaceae
GenusPrevotella
SpeciesPrevotella intermedia
StrainATCC 25611 = DSM 20706 ATCC 25611 and strain-17

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Prevotella intermedia ATCC 25611 = DSM 20706 str. ATCC 25611 and strain-17
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Prevotella intermedia ATCC 25611 = DSM 20706 strain ATCC 25611

Gene Summary

Adenine Count

564859 bp

Thymine Count

560045 bp

Guanine Count

420987 bp

Cytosine Count

420044 bp

Genome Length

1965935 bp

Protein-coding Genes

1585 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
carbon-nitrogen hydrolaseBWX39_RS05415Not AvailablePositive1291718 - 129260233310.4
gnat family n-acetyltransferaseBWX39_RS05420Not AvailablePositive1292616 - 129312518962.7
sugar o-acetyltransferaseBWX39_RS05425Not AvailablePositive1293122 - 129368220821.9
rlua family pseudouridine synthaseBWX39_RS05430Not AvailablePositive1293807 - 129470634626.3
dnaj domain-containing proteinBWX39_RS05435Not AvailableNegative1295213 - 129586624441.0
carboxynorspermidine decarboxylaseBWX39_RS05440Not AvailableNegative1295983 - 129714644504.8
thiamine phosphate synthaseBWX39_RS05445Not AvailablePositive1297215 - 129782623555.3
ribose-phosphate pyrophosphokinaseBWX39_RS05450Not AvailablePositive1297861 - 129879934272.4
duf2141 domain-containing proteinBWX39_RS05455Not AvailablePositive1299021 - 129939813870.1
outer membrane beta-barrel family proteinBWX39_RS05460Not AvailablePositive1299464 - 130157580187.7

Displaying genes 1031 – 1040 of 1638 in total

Metabolites

206 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001111keto-D-tagaturonateC6H9O7Chemical structure of keto-D-tagaturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm00013353-oxo-3-phenylpropanoateC9H7O3Chemical structure of 3-oxo-3-phenylpropanoateNot available
Average163.153Da
Monoisotopic163.0400677Da

Displaying 1–10 of 206 metabolites

Health Effects

No health effects information available for this bacterium.