Prevotella intermedia ATCC 25611 = DSM 20706 str. ATCC 25611 and strain-17

Gram-negativeAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Prevotellaceae

Genus

Prevotella

Description

Prevotella intermedia ATCC 25611 (also known as DSM 20706 str. ATCC 25611 and strain-17) is a Gram-negative anaerobic bacterium belonging to the genus Prevotella. This species is characterized by its inability to utilize oxygen for growth, necessitating anaerobic conditions for optimal proliferation. As a member of the diverse microbial community, Prevotella intermedia is known to thrive in environments such as the human oral cavity and gastrointestinal tract, where it plays a role in the complex interplay of microbial interactions. The Gram-negative nature of Prevotella intermedia indicates that it possesses a thin peptidoglycan layer and an outer membrane containing lipopolysaccharides, which can influence its interactions with the host and other microorganisms. Its anaerobic requirement further highlights the importance of specific environmental conditions for its survival and growth, limiting its habitat to oxygen-depleted niches. Given the ecological role of Prevotella intermedia in the human microbiome, it is suggested that its presence may contribute to the metabolic processes associated with carbohydrate fermentation and the production of short-chain fatty acids, which are important for gut health. Moreover, its adaptation to anaerobic environments underscores the significance of microbial diversity in maintaining homeostasis within the host's microbiota. This adaptability to low-oxygen habitats allows Prevotella intermedia to participate actively in the degradation of dietary components, thereby influencing both nutrient availability and the overall metabolic landscape of its ecological niche.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPrevotellaceae
GenusPrevotella
SpeciesPrevotella intermedia
StrainATCC 25611 = DSM 20706 ATCC 25611 and strain-17

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Prevotella intermedia ATCC 25611 = DSM 20706 str. ATCC 25611 and strain-17


Gene Summary

Adenine Count

564859 bp

Thymine Count

560045 bp

Guanine Count

420987 bp

Cytosine Count

420044 bp

Genome Length

1965935 bp

Protein-coding Genes

1585 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
30s ribosomal protein s7BWX39_RS00005Not Available-2 - 27310466.1
preprotein translocase subunit seceBWX39_RS00010Not Available-288 - 4917787.62
Trna-trpNot AvailableNot Available+504 - 578Not Available
30s ribosomal protein s7BWX39_RS00020Not Available-625 - 181644305.2
Trna-thrNot AvailableNot Available+1885 - 1959Not Available
Trna-glyNot AvailableNot Available+1967 - 2039Not Available
Trna-tyrNot AvailableNot Available+2105 - 2187Not Available
Trna-thrNot AvailableNot Available+2209 - 2281Not Available
30s ribosomal protein s7BWX39_RS11970Not Available-2389 - 26058386.95
site-specific integraseBWX39_RS12285Not Available-3136 - 33277323.77

Displaying genes 1 – 10 of 1638 in total

Metabolites

206 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001111keto-D-tagaturonateC6H9O7Chemical structure of keto-D-tagaturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm00013353-oxo-3-phenylpropanoateC9H7O3Chemical structure of 3-oxo-3-phenylpropanoateNot available
Average163.153Da
Monoisotopic163.0400677Da

Displaying 1–10 of 206 metabolites