Papillibacter cinnamivorans DSM 12816

anaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Papillibacter

Description

Papillibacter cinnamivorans DSM 12816 is an anaerobic bacterium, indicating that it thrives in environments devoid of oxygen. This metabolic characteristic is significant as it positions P. cinnamivorans within ecological niches that are rich in organic materials, where oxygen levels are typically low. The organism possesses a single replicon, suggesting a streamlined genetic structure that may contribute to its adaptability in anaerobic conditions. The species is cataloged with the accession number FWXW00000000.1, which provides a reference for genomic studies and further research. This accession allows for the exploration of its genetic makeup and potential biochemical pathways. Understanding the genomic characteristics of P. cinnamivorans may yield insights into its metabolic capabilities and ecological roles. In terms of ecological significance, the anaerobic nature of P. cinnamivorans suggests it may play a role in the degradation of organic materials in environments such as sediments, digestive tracts of animals, or other low-oxygen habitats. Such microorganisms are often involved in nutrient cycling, contributing to the breakdown of complex organic compounds, thereby facilitating the recycling of nutrients in their respective ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusPapillibacter
SpeciesPapillibacter cinnamivorans
StrainDSM 12816

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Papillibacter cinnamivorans DSM 12816 genome assembly, contig:

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2609 genes

Non-Coding Genes

89 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcriptional regulator, tetr familySAMN02745168_2744Not AvailablePositive2516303 - 251693824245.1
acyl-coa synthetase (ndp forming)SAMN02745168_2745Not AvailablePositive2517311 - 251941075185.8
radical sam superfamily enzyme, moaa/nifb/pqqe/skfb familySAMN02745168_2746Not AvailablePositive2519970 - 252138854147.6
udp-galactopyranose mutaseSAMN02745168_2747Not AvailableNegative2521505 - 252267743822.1
nucleoside-diphosphate-sugar epimeraseSAMN02745168_2748Not AvailableNegative2522674 - 252358832532.0
udp-glucuronate decarboxylaseSAMN02745168_2749Not AvailableNegative2523627 - 252472741526.3
l,d-peptidoglycan transpeptidase ykud, erfk/ybis/ycfs/ynhg familySAMN02745168_2750Not AvailableNegative2524858 - 252574231877.2
hypothetical proteinSAMN02745168_2751Not AvailablePositive2525938 - 252642317968.4
hypothetical proteinSAMN02745168_2752Not AvailablePositive2526828 - 252786835494.0
3-keto-5-aminohexanoate cleavage enzymeSAMN02745168_2753Not AvailablePositive2528115 - 252913738410.3

Displaying genes 2351 – 2360 of 2700 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.