Papillibacter cinnamivorans DSM 12816

anaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Papillibacter

Description

Papillibacter cinnamivorans DSM 12816 is an anaerobic bacterium, indicating that it thrives in environments devoid of oxygen. This metabolic characteristic is significant as it positions P. cinnamivorans within ecological niches that are rich in organic materials, where oxygen levels are typically low. The organism possesses a single replicon, suggesting a streamlined genetic structure that may contribute to its adaptability in anaerobic conditions. The species is cataloged with the accession number FWXW00000000.1, which provides a reference for genomic studies and further research. This accession allows for the exploration of its genetic makeup and potential biochemical pathways. Understanding the genomic characteristics of P. cinnamivorans may yield insights into its metabolic capabilities and ecological roles. In terms of ecological significance, the anaerobic nature of P. cinnamivorans suggests it may play a role in the degradation of organic materials in environments such as sediments, digestive tracts of animals, or other low-oxygen habitats. Such microorganisms are often involved in nutrient cycling, contributing to the breakdown of complex organic compounds, thereby facilitating the recycling of nutrients in their respective ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusPapillibacter
SpeciesPapillibacter cinnamivorans
StrainDSM 12816

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Papillibacter cinnamivorans DSM 12816 genome assembly, contig:

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2609 genes

Non-Coding Genes

89 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
benzoylsuccinyl-coa thiolase bbsb subunitSAMN02745168_2630Not AvailableNegative2399507 - 240067341227.0
benzoylsuccinyl-coa thiolase bbsa subunitSAMN02745168_2631Not AvailableNegative2400670 - 240108615187.1
formyl-coa transferaseSAMN02745168_2632Not AvailableNegative2401119 - 240230943366.6
transcriptional regulator containing pas, aaa-type atpase, and dna-binding fis domainsSAMN02745168_2633Not AvailablePositive2402761 - 240448565513.3
uncharacterized protein, pyridoxamine 5'-phosphate oxidase (pnpox-like) familySAMN02745168_2634Not AvailablePositive2404654 - 240505515037.6
s-layer homology domain-containing proteinSAMN02745168_2635Not AvailablePositive2405474 - 2409229130926.0
putative dna-binding domain-containing proteinSAMN02745168_2637Not AvailableNegative2409666 - 2412881124026.0
cro/c1-type hth dna-binding domain-containing proteinSAMN02745168_2638Not AvailableNegative2413108 - 24133479042.17
uncharacterized spbc2 prophage-derived protein yoqjSAMN02745168_2639Not AvailablePositive2413503 - 241406320701.2
methylmalonyl-coa/ethylmalonyl-coa epimeraseSAMN02745168_2640Not AvailableNegative2414699 - 241511815490.6

Displaying genes 2241 – 2250 of 2700 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.