Papillibacter cinnamivorans DSM 12816

anaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Papillibacter

Description

Papillibacter cinnamivorans DSM 12816 is an anaerobic bacterium, indicating that it thrives in environments devoid of oxygen. This metabolic characteristic is significant as it positions P. cinnamivorans within ecological niches that are rich in organic materials, where oxygen levels are typically low. The organism possesses a single replicon, suggesting a streamlined genetic structure that may contribute to its adaptability in anaerobic conditions. The species is cataloged with the accession number FWXW00000000.1, which provides a reference for genomic studies and further research. This accession allows for the exploration of its genetic makeup and potential biochemical pathways. Understanding the genomic characteristics of P. cinnamivorans may yield insights into its metabolic capabilities and ecological roles. In terms of ecological significance, the anaerobic nature of P. cinnamivorans suggests it may play a role in the degradation of organic materials in environments such as sediments, digestive tracts of animals, or other low-oxygen habitats. Such microorganisms are often involved in nutrient cycling, contributing to the breakdown of complex organic compounds, thereby facilitating the recycling of nutrients in their respective ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusPapillibacter
SpeciesPapillibacter cinnamivorans
StrainDSM 12816

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Papillibacter cinnamivorans DSM 12816 genome assembly, contig:

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2609 genes

Non-Coding Genes

89 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cystathione beta-lyaseSAMN02745168_1971Not AvailableNegative1689977 - 169116144226.2
trna a37 threonylcarbamoyladenosine dehydrataseSAMN02745168_1972Not AvailablePositive1691406 - 169218827998.5
alpha-tubulin suppressorSAMN02745168_1973Not AvailableNegative1692486 - 169409356520.6
menaquinone-dependent protoporphyrinogen oxidaseSAMN02745168_1974Not AvailableNegative1694145 - 169462117336.9
uncharacterized protein, contains fmn-binding domainSAMN02745168_1975Not AvailableNegative1694640 - 169502613647.6
d-methionine transport system substrate-binding proteinSAMN02745168_1976Not AvailableNegative1695210 - 169606729973.4
d-methionine transport system permease proteinSAMN02745168_1977Not AvailableNegative1696116 - 169677523092.4
d-methionine transport system atp-binding proteinSAMN02745168_1978Not AvailableNegative1696765 - 169778437635.9
cysteine synthase aSAMN02745168_1979Not AvailableNegative1698016 - 169894832795.2
peptide/nickel transport system atp-binding proteinSAMN02745168_1980Not AvailableNegative1699148 - 170015537309.3

Displaying genes 1601 – 1610 of 2700 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.