Papillibacter cinnamivorans DSM 12816

anaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Papillibacter

Description

Papillibacter cinnamivorans DSM 12816 is an anaerobic bacterium, indicating that it thrives in environments devoid of oxygen. This metabolic characteristic is significant as it positions P. cinnamivorans within ecological niches that are rich in organic materials, where oxygen levels are typically low. The organism possesses a single replicon, suggesting a streamlined genetic structure that may contribute to its adaptability in anaerobic conditions. The species is cataloged with the accession number FWXW00000000.1, which provides a reference for genomic studies and further research. This accession allows for the exploration of its genetic makeup and potential biochemical pathways. Understanding the genomic characteristics of P. cinnamivorans may yield insights into its metabolic capabilities and ecological roles. In terms of ecological significance, the anaerobic nature of P. cinnamivorans suggests it may play a role in the degradation of organic materials in environments such as sediments, digestive tracts of animals, or other low-oxygen habitats. Such microorganisms are often involved in nutrient cycling, contributing to the breakdown of complex organic compounds, thereby facilitating the recycling of nutrients in their respective ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusPapillibacter
SpeciesPapillibacter cinnamivorans
StrainDSM 12816

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Papillibacter cinnamivorans DSM 12816 genome assembly, contig:

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2609 genes

Non-Coding Genes

89 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alanine-synthesizing transaminaseSAMN02745168_1735Not AvailablePositive1459603 - 146085046207.6
pas domain s-box-containing proteinSAMN02745168_1736Not AvailablePositive1461072 - 146250253720.7
4-hydroxybutyryl-coa dehydratase / vinylacetyl-coa-delta-isomeraseSAMN02745168_1737Not AvailablePositive1462744 - 146419553681.9
fe-s cluster biogenesis protein nfua, 4fe-4s-binding domainSAMN02745168_1738Not AvailablePositive1464221 - 146452911474.9
hypothetical proteinSAMN02745168_1739Not AvailableNegative1464875 - 14650275150.99
zinc transporter, zip familySAMN02745168_1740Not AvailablePositive1465217 - 146593924674.2
transcriptional regulator containing pas, aaa-type atpase, and dna-binding fis domainsSAMN02745168_1741Not AvailableNegative1466042 - 146742452196.4
glyoxylase, beta-lactamase superfamily iiSAMN02745168_1742Not AvailablePositive1467813 - 146881738162.3
acetyl-coa c-acetyltransferaseSAMN02745168_1743Not AvailablePositive1468846 - 147001241084.4
duf35 ob-fold domain-containing protein, acyl-coa-associatedSAMN02745168_1744Not AvailablePositive1470014 - 14702448458.89

Displaying genes 1371 – 1380 of 2700 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.