Papillibacter cinnamivorans DSM 12816

anaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Papillibacter

Description

Papillibacter cinnamivorans DSM 12816 is an anaerobic bacterium, indicating that it thrives in environments devoid of oxygen. This metabolic characteristic is significant as it positions P. cinnamivorans within ecological niches that are rich in organic materials, where oxygen levels are typically low. The organism possesses a single replicon, suggesting a streamlined genetic structure that may contribute to its adaptability in anaerobic conditions. The species is cataloged with the accession number FWXW00000000.1, which provides a reference for genomic studies and further research. This accession allows for the exploration of its genetic makeup and potential biochemical pathways. Understanding the genomic characteristics of P. cinnamivorans may yield insights into its metabolic capabilities and ecological roles. In terms of ecological significance, the anaerobic nature of P. cinnamivorans suggests it may play a role in the degradation of organic materials in environments such as sediments, digestive tracts of animals, or other low-oxygen habitats. Such microorganisms are often involved in nutrient cycling, contributing to the breakdown of complex organic compounds, thereby facilitating the recycling of nutrients in their respective ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusPapillibacter
SpeciesPapillibacter cinnamivorans
StrainDSM 12816

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Papillibacter cinnamivorans DSM 12816 genome assembly, contig:

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2609 genes

Non-Coding Genes

89 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
arginyl-trna synthetaseSAMN02745168_1354Not AvailableNegative1049758 - 105144962485.3
uncharacterized beta-barrel protein ywib, duf1934 familySAMN02745168_1355Not AvailableNegative1051459 - 105191416482.4
glutamate racemaseSAMN02745168_1356Not AvailableNegative1052071 - 105288629727.6
hypothetical proteinSAMN02745168_1357Not AvailablePositive1053284 - 105369115774.3
molecular chaperone htpgSAMN02745168_1358Not AvailableNegative1053946 - 105586273123.9
hypothetical proteinSAMN02745168_1359Not AvailableNegative1056052 - 105731747529.9
uncharacterized membrane-anchored protein yitt, contains duf161 and duf2179 domainsSAMN02745168_1360Not AvailableNegative1057360 - 105823531364.1
asparaginyl-trna synthetaseSAMN02745168_1361Not AvailableNegative1058268 - 105966252567.7
uncharacterized membrane protein ysda, duf1294 familySAMN02745168_1362Not AvailablePositive1059854 - 106013810818.8
dolichyl-phosphate-mannose-protein mannosyltransferaseSAMN02745168_1363Not AvailableNegative1060240 - 106193464230.3

Displaying genes 1001 – 1010 of 2700 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.