Malonomonas rubra DSM 5091

anaerobic

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfuromonadia

Order

Desulfuromonadales

Family

Geopsychrobacteraceae

Genus

Malonomonas

Description

Malonomonas rubra DSM 5091 is an anaerobic bacterium that is characterized by its requirement for an oxygen-free environment for growth and metabolism. This organism possesses a single replicon, indicating a streamlined genetic structure which is typical for certain anaerobic bacteria. The strain is cataloged under the accession number FQZT00000000.1, providing a reference for genomic and taxonomic studies. Understanding the genomic makeup of Malonomonas rubra can offer insights into its metabolic pathways and potential applications in biotechnology or environmental microbiology. The anaerobic nature of Malonomonas rubra suggests that it may play a role in specific ecological niches where oxygen is limited or absent, such as in sediment layers of aquatic environments or in the guts of certain animals. Its metabolic processes can contribute to nutrient cycling and organic matter decomposition in these anaerobic habitats. The study of such microorganisms is crucial for comprehending the dynamics of microbial communities and their functions in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfuromonadia
OrderDesulfuromonadales
FamilyGeopsychrobacteraceae
GenusMalonomonas
SpeciesMalonomonas rubra
StrainDSM 5091

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Malonomonas rubra DSM 5091 genome assembly, contig:

Gene Summary

Adenine Count

958164 bp

Thymine Count

925373 bp

Guanine Count

1012900 bp

Cytosine Count

1065194 bp

Genome Length

3961631 bp

Protein-coding Genes

3652 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc-type transport system, involved in lipoprotein release, permease componentSAMN02745165_00829Not AvailableNegative900705 - 90193445425.2
abc-type transport system, involved in lipoprotein release, permease componentSAMN02745165_00830Not AvailableNegative901937 - 90315444143.8
outer membrane lipoprotein-sorting proteinSAMN02745165_00831Not AvailableNegative903154 - 90388828690.0
pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing proteinSAMN02745165_00832Not AvailableNegative903925 - 90574868036.8
hypothetical proteinSAMN02745165_00833Not AvailablePositive905915 - 90697640162.0
predicted metal-dependent peptidaseSAMN02745165_00834Not AvailablePositive906966 - 90816245318.9
hypothetical proteinSAMN02745165_00835Not AvailablePositive908166 - 90857916144.0
pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing proteinSAMN02745165_00836Not AvailablePositive908778 - 91096482626.8
peptidyl-prolyl cis-trans isomerase b (cyclophilin b)SAMN02745165_00837Not AvailablePositive911081 - 91159018607.0
putative mn2+ efflux pump mntpSAMN02745165_00838Not AvailablePositive911749 - 91231520072.3

Displaying genes 851 – 860 of 3720 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm00040892'-(5''-triphospho-alpha-D-ribosyl)-3'-dephospho-CoAC26H40N7O26P5SChemical structure of 2'-(5''-triphospho-alpha-D-ribosyl)-3'-dephospho-CoANot available
Average1053.56Da
Monoisotopic1053.046472079Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.