Malonomonas rubra DSM 5091

anaerobic

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfuromonadia

Order

Desulfuromonadales

Family

Geopsychrobacteraceae

Genus

Malonomonas

Description

Malonomonas rubra DSM 5091 is an anaerobic bacterium that is characterized by its requirement for an oxygen-free environment for growth and metabolism. This organism possesses a single replicon, indicating a streamlined genetic structure which is typical for certain anaerobic bacteria. The strain is cataloged under the accession number FQZT00000000.1, providing a reference for genomic and taxonomic studies. Understanding the genomic makeup of Malonomonas rubra can offer insights into its metabolic pathways and potential applications in biotechnology or environmental microbiology. The anaerobic nature of Malonomonas rubra suggests that it may play a role in specific ecological niches where oxygen is limited or absent, such as in sediment layers of aquatic environments or in the guts of certain animals. Its metabolic processes can contribute to nutrient cycling and organic matter decomposition in these anaerobic habitats. The study of such microorganisms is crucial for comprehending the dynamics of microbial communities and their functions in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfuromonadia
OrderDesulfuromonadales
FamilyGeopsychrobacteraceae
GenusMalonomonas
SpeciesMalonomonas rubra
StrainDSM 5091

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Malonomonas rubra DSM 5091 genome assembly, contig:

Gene Summary

Adenine Count

958164 bp

Thymine Count

925373 bp

Guanine Count

1012900 bp

Cytosine Count

1065194 bp

Genome Length

3961631 bp

Protein-coding Genes

3652 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
serine phosphataseSAMN02745165_00466Not AvailablePositive510712 - 513930119268.0
anti-sigma b factor antagonistSAMN02745165_00467Not AvailablePositive513977 - 51431212556.1
serine/threonine-protein kinase rsbwSAMN02745165_00468Not AvailablePositive514349 - 51477115575.8
haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed/haloacid dehalogenase superfamily, subfamily ia, variant 1 with third motif having dx(3-4)d or dx(3-4)eSAMN02745165_00469Not AvailableNegative514809 - 51543222649.1
phosphatidylglycerol:prolipoprotein diacylglycerol transferaseSAMN02745165_00470Not AvailableNegative515419 - 51620729226.3
23s rrna pseudouridine1911/1915/1917 synthaseSAMN02745165_00471Not AvailableNegative516204 - 51712734668.6
integration host factor subunit betaSAMN02745165_00472Not AvailableNegative517627 - 51790510416.4
signal peptide peptidase a. serine peptidase. merops family s49SAMN02745165_00473Not AvailableNegative517941 - 51880131202.7
ssu ribosomal protein s1pSAMN02745165_00474Not AvailableNegative518893 - 52061763334.6
4-hydroxy-3-methylbut-2-enyl diphosphate reductaseSAMN02745165_00475Not AvailableNegative520768 - 52161030574.8

Displaying genes 491 – 500 of 3720 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm00040892'-(5''-triphospho-alpha-D-ribosyl)-3'-dephospho-CoAC26H40N7O26P5SChemical structure of 2'-(5''-triphospho-alpha-D-ribosyl)-3'-dephospho-CoANot available
Average1053.56Da
Monoisotopic1053.046472079Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.