Malonomonas rubra DSM 5091

anaerobic

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfuromonadia

Order

Desulfuromonadales

Family

Geopsychrobacteraceae

Genus

Malonomonas

Description

Malonomonas rubra DSM 5091 is an anaerobic bacterium that is characterized by its requirement for an oxygen-free environment for growth and metabolism. This organism possesses a single replicon, indicating a streamlined genetic structure which is typical for certain anaerobic bacteria. The strain is cataloged under the accession number FQZT00000000.1, providing a reference for genomic and taxonomic studies. Understanding the genomic makeup of Malonomonas rubra can offer insights into its metabolic pathways and potential applications in biotechnology or environmental microbiology. The anaerobic nature of Malonomonas rubra suggests that it may play a role in specific ecological niches where oxygen is limited or absent, such as in sediment layers of aquatic environments or in the guts of certain animals. Its metabolic processes can contribute to nutrient cycling and organic matter decomposition in these anaerobic habitats. The study of such microorganisms is crucial for comprehending the dynamics of microbial communities and their functions in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfuromonadia
OrderDesulfuromonadales
FamilyGeopsychrobacteraceae
GenusMalonomonas
SpeciesMalonomonas rubra
StrainDSM 5091

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Malonomonas rubra DSM 5091 genome assembly, contig:

Gene Summary

Adenine Count

958164 bp

Thymine Count

925373 bp

Guanine Count

1012900 bp

Cytosine Count

1065194 bp

Genome Length

3961631 bp

Protein-coding Genes

3652 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
shikimate dehydrogenaseSAMN02745165_03328Not AvailableNegative3565472 - 356634130675.2
ribosomal protein s18 acetylase rimiSAMN02745165_03329Not AvailablePositive3566583 - 356708919054.8
acetylornithine deacetylaseSAMN02745165_03330Not AvailablePositive3567082 - 356821542015.0
magnesium transporterSAMN02745165_03331Not AvailablePositive3568342 - 356974851101.6
hypothetical proteinSAMN02745165_03332Not AvailablePositive3569745 - 357099545398.9
pas domain s-box-containing proteinSAMN02745165_03333Not AvailableNegative3570964 - 357338491509.7
sagb-type dehydrogenase domain-containing proteinSAMN02745165_03334Not AvailableNegative3573473 - 357423428445.0
aspartate racemaseSAMN02745165_03335Not AvailablePositive3574407 - 357509925424.1
nitrogen fixation protein nifuSAMN02745165_03336Not AvailableNegative3575174 - 357562316462.6
response regulator receiver and antar domain proteinSAMN02745165_03337Not AvailablePositive3575774 - 357633720622.1

Displaying genes 3311 – 3320 of 3720 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm00040892'-(5''-triphospho-alpha-D-ribosyl)-3'-dephospho-CoAC26H40N7O26P5SChemical structure of 2'-(5''-triphospho-alpha-D-ribosyl)-3'-dephospho-CoANot available
Average1053.56Da
Monoisotopic1053.046472079Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.