Malonomonas rubra DSM 5091

anaerobic

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfuromonadia

Order

Desulfuromonadales

Family

Geopsychrobacteraceae

Genus

Malonomonas

Description

Malonomonas rubra DSM 5091 is an anaerobic bacterium that is characterized by its requirement for an oxygen-free environment for growth and metabolism. This organism possesses a single replicon, indicating a streamlined genetic structure which is typical for certain anaerobic bacteria. The strain is cataloged under the accession number FQZT00000000.1, providing a reference for genomic and taxonomic studies. Understanding the genomic makeup of Malonomonas rubra can offer insights into its metabolic pathways and potential applications in biotechnology or environmental microbiology. The anaerobic nature of Malonomonas rubra suggests that it may play a role in specific ecological niches where oxygen is limited or absent, such as in sediment layers of aquatic environments or in the guts of certain animals. Its metabolic processes can contribute to nutrient cycling and organic matter decomposition in these anaerobic habitats. The study of such microorganisms is crucial for comprehending the dynamics of microbial communities and their functions in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfuromonadia
OrderDesulfuromonadales
FamilyGeopsychrobacteraceae
GenusMalonomonas
SpeciesMalonomonas rubra
StrainDSM 5091

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Malonomonas rubra DSM 5091 genome assembly, contig:

Gene Summary

Adenine Count

958164 bp

Thymine Count

925373 bp

Guanine Count

1012900 bp

Cytosine Count

1065194 bp

Genome Length

3961631 bp

Protein-coding Genes

3652 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hemerythrinSAMN02745165_01160Not AvailableNegative1249645 - 125006116305.4
pas domain s-box-containing proteinSAMN02745165_01161Not AvailableNegative1250076 - 125210976104.1
bacterial peptide chain release factor 3 (brf-3)SAMN02745165_01162Not AvailableNegative1252250 - 125383659612.0
kdo2-lipid iv(a) lauroyltransferaseSAMN02745165_01163Not AvailableNegative1253829 - 125478836620.0
uracil phosphoribosyltransferaseSAMN02745165_01164Not AvailablePositive1255093 - 125571922796.8
uracil permeaseSAMN02745165_01165Not AvailablePositive1255744 - 125706045296.8
conserved hypothetical proteinSAMN02745165_01166Not AvailableNegative1257137 - 125792828661.4
ribosomal large subunit pseudouridine synthase dSAMN02745165_01167Not AvailableNegative1257947 - 125893336429.6
hypothetical proteinSAMN02745165_01168Not AvailableNegative1258934 - 125920310269.2
fmn phosphatase yigb, had superfamilySAMN02745165_01169Not AvailableNegative1259330 - 126007628534.4

Displaying genes 1181 – 1190 of 3720 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm00040892'-(5''-triphospho-alpha-D-ribosyl)-3'-dephospho-CoAC26H40N7O26P5SChemical structure of 2'-(5''-triphospho-alpha-D-ribosyl)-3'-dephospho-CoANot available
Average1053.56Da
Monoisotopic1053.046472079Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.