Devosia limi DSM 17137

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Devosiaceae

Genus

Devosia

Description

Devosia limi DSM 17137 is a Gram-negative, non-motile bacterium characterized by its rod shape. This species is aerobic, requiring oxygen for growth, and thrives optimally at a temperature of 29°C, situating it within the mesophilic temperature range. Devosia limi is notable for its single replicon, indicating a streamlined genomic structure which may contribute to its adaptability in various environments. It is also classified as non-spore-forming, suggesting a reliance on other survival strategies in adverse conditions, rather than entering a dormant spore state. The growth preferences and physiological traits of Devosia limi reflect its ecological niche, potentially influencing its interactions with other microorganisms in its habitat. Its aerobic metabolism and temperature preferences may be indicative of its role in nutrient cycling and decomposition within soil or aquatic ecosystems, where it could participate in the breakdown of organic matter and contribute to the overall microbial diversity. Further studies on its ecological roles could elucidate its significance in specific biogeochemical processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyDevosiaceae
GenusDevosia
SpeciesDevosia limi
StrainDSM 17137

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Devosia limi DSM 17137 genome assembly, contig:

Gene Summary

Adenine Count

798843 bp

Thymine Count

803222 bp

Guanine Count

1343591 bp

Cytosine Count

1351571 bp

Genome Length

4297655 bp

Protein-coding Genes

4048 genes

Non-Coding Genes

89 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
two-component system, chemotaxis family, response regulator cheySAMN02745223_03818Not AvailableNegative3960985 - 396135013335.2
stas domain-containing proteinSAMN02745223_03819Not AvailableNegative3961347 - 39616379990.15
predicted homoserine dehydrogenase, contains c-terminal saf domainSAMN02745223_03820Not AvailablePositive3961865 - 396318146562.6
nadph:quinone reductaseSAMN02745223_03821Not AvailableNegative3963337 - 396430533569.0
nadph-dependent ferric siderophore reductase, contains fad-binding and sip domainsSAMN02745223_03822Not AvailablePositive3964471 - 396528029444.9
transposase is116/is110/is902 family proteinSAMN02745223_03823Not AvailablePositive3965608 - 396593011365.1
16s rrna (guanine966-n2)-methyltransferaseSAMN02745223_03824Not AvailablePositive3966060 - 396661719548.4
fur family transcriptional regulator, zinc uptake regulatorSAMN02745223_03825Not AvailableNegative3966751 - 396716715114.3
zinc transport system permease proteinSAMN02745223_03826Not AvailableNegative3967151 - 396797528405.1
hypothetical proteinSAMN02745223_03827Not AvailableNegative3967975 - 396828010329.4

Displaying genes 3811 – 3820 of 4137 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.