Devosia limi DSM 17137

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Devosiaceae

Genus

Devosia

Description

Devosia limi DSM 17137 is a Gram-negative, non-motile bacterium characterized by its rod shape. This species is aerobic, requiring oxygen for growth, and thrives optimally at a temperature of 29°C, situating it within the mesophilic temperature range. Devosia limi is notable for its single replicon, indicating a streamlined genomic structure which may contribute to its adaptability in various environments. It is also classified as non-spore-forming, suggesting a reliance on other survival strategies in adverse conditions, rather than entering a dormant spore state. The growth preferences and physiological traits of Devosia limi reflect its ecological niche, potentially influencing its interactions with other microorganisms in its habitat. Its aerobic metabolism and temperature preferences may be indicative of its role in nutrient cycling and decomposition within soil or aquatic ecosystems, where it could participate in the breakdown of organic matter and contribute to the overall microbial diversity. Further studies on its ecological roles could elucidate its significance in specific biogeochemical processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyDevosiaceae
GenusDevosia
SpeciesDevosia limi
StrainDSM 17137

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Devosia limi DSM 17137 genome assembly, contig:

Gene Summary

Adenine Count

798843 bp

Thymine Count

803222 bp

Guanine Count

1343591 bp

Cytosine Count

1351571 bp

Genome Length

4297655 bp

Protein-coding Genes

4048 genes

Non-Coding Genes

89 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lipid kinase, yegs/rv2252/bmru familySAMN02745223_03658Not AvailableNegative3798938 - 379983732204.8
branched-chain amino acid transport system permease proteinSAMN02745223_03659Not AvailableNegative3799983 - 380096334715.6
branched-chain amino acid transport system permease proteinSAMN02745223_03660Not AvailableNegative3800963 - 380185031517.8
branched-chain amino acid transport system substrate-binding proteinSAMN02745223_03661Not AvailableNegative3801914 - 380311642584.0
branched-chain amino acid transport system atp-binding proteinSAMN02745223_03662Not AvailableNegative3803159 - 380389326480.2
amino acid/amide abc transporter atp-binding protein 1, haat family (tc 3.a.1.4.-)SAMN02745223_03663Not AvailableNegative3803886 - 380467128270.1
3-hydroxybutyrate dehydrogenaseSAMN02745223_03664Not AvailableNegative3804668 - 380544727347.8
transcriptional regulator containing pas, aaa-type atpase, and dna-binding fis domainsSAMN02745223_03665Not AvailableNegative3805606 - 380701851682.6
4-hydroxy-tetrahydrodipicolinate synthaseSAMN02745223_03666Not AvailableNegative3807254 - 380818333524.6
regulator of rnase e activity rraaSAMN02745223_03667Not AvailablePositive3808301 - 380894823419.3

Displaying genes 3651 – 3660 of 4137 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.