Devosia limi DSM 17137

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Devosiaceae

Genus

Devosia

Description

Devosia limi DSM 17137 is a Gram-negative, non-motile bacterium characterized by its rod shape. This species is aerobic, requiring oxygen for growth, and thrives optimally at a temperature of 29°C, situating it within the mesophilic temperature range. Devosia limi is notable for its single replicon, indicating a streamlined genomic structure which may contribute to its adaptability in various environments. It is also classified as non-spore-forming, suggesting a reliance on other survival strategies in adverse conditions, rather than entering a dormant spore state. The growth preferences and physiological traits of Devosia limi reflect its ecological niche, potentially influencing its interactions with other microorganisms in its habitat. Its aerobic metabolism and temperature preferences may be indicative of its role in nutrient cycling and decomposition within soil or aquatic ecosystems, where it could participate in the breakdown of organic matter and contribute to the overall microbial diversity. Further studies on its ecological roles could elucidate its significance in specific biogeochemical processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyDevosiaceae
GenusDevosia
SpeciesDevosia limi
StrainDSM 17137

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Devosia limi DSM 17137 genome assembly, contig:

Gene Summary

Adenine Count

798843 bp

Thymine Count

803222 bp

Guanine Count

1343591 bp

Cytosine Count

1351571 bp

Genome Length

4297655 bp

Protein-coding Genes

4048 genes

Non-Coding Genes

89 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
chloramphenicol o-acetyltransferase type bSAMN02745223_03416Not AvailableNegative3561610 - 356224823431.6
hypothetical proteinSAMN02745223_03417Not AvailableNegative3562389 - 35626469236.84
hypothetical proteinSAMN02745223_03418Not AvailableNegative3562770 - 35629737633.15
pts system, nitrogen regulatory iia componentSAMN02745223_03419Not AvailablePositive3563251 - 356370315772.9
methyl-accepting chemotaxis proteinSAMN02745223_03420Not AvailablePositive3563999 - 356604473400.3
ribd c-terminal domain-containing proteinSAMN02745223_03421Not AvailableNegative3566121 - 356671121395.6
uncharacterized conserved protein yndb, ahsa1/start domainSAMN02745223_03422Not AvailableNegative3566708 - 356751729283.0
3-methyladenine dna glycosylase alkcSAMN02745223_03423Not AvailableNegative3567584 - 356832426530.8
dna-binding transcriptional regulator, marr familySAMN02745223_03424Not AvailableNegative3568333 - 356882718099.7
transcriptional regulator, tetr familySAMN02745223_03425Not AvailableNegative3568876 - 356947221165.5

Displaying genes 3411 – 3420 of 4137 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.