Devosia limi DSM 17137

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Devosiaceae

Genus

Devosia

Description

Devosia limi DSM 17137 is a Gram-negative, non-motile bacterium characterized by its rod shape. This species is aerobic, requiring oxygen for growth, and thrives optimally at a temperature of 29°C, situating it within the mesophilic temperature range. Devosia limi is notable for its single replicon, indicating a streamlined genomic structure which may contribute to its adaptability in various environments. It is also classified as non-spore-forming, suggesting a reliance on other survival strategies in adverse conditions, rather than entering a dormant spore state. The growth preferences and physiological traits of Devosia limi reflect its ecological niche, potentially influencing its interactions with other microorganisms in its habitat. Its aerobic metabolism and temperature preferences may be indicative of its role in nutrient cycling and decomposition within soil or aquatic ecosystems, where it could participate in the breakdown of organic matter and contribute to the overall microbial diversity. Further studies on its ecological roles could elucidate its significance in specific biogeochemical processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyDevosiaceae
GenusDevosia
SpeciesDevosia limi
StrainDSM 17137

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Devosia limi DSM 17137 genome assembly, contig:

Gene Summary

Adenine Count

798843 bp

Thymine Count

803222 bp

Guanine Count

1343591 bp

Cytosine Count

1351571 bp

Genome Length

4297655 bp

Protein-coding Genes

4048 genes

Non-Coding Genes

89 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
selenocysteine lyase/cysteine desulfuraseSAMN02745223_03224Not AvailablePositive3371442 - 337267444191.7
threonine/homoserine efflux transporter rhtaSAMN02745223_03225Not AvailablePositive3372756 - 337364031158.2
hypothetical proteinSAMN02745223_03226Not AvailableNegative3373628 - 337402314161.1
n-acetylglutamate synthase, gnat familySAMN02745223_03227Not AvailableNegative3374700 - 337515216403.4
thymidine kinaseSAMN02745223_03228Not AvailablePositive3375270 - 337586321885.3
acyl-coa thioesterase yciaSAMN02745223_03229Not AvailablePositive3375864 - 337625314027.0
uncharacterized conserved protein yraiSAMN02745223_03230Not AvailablePositive3376337 - 337704125024.5
peptidase inhibitor family i36SAMN02745223_03231Not AvailablePositive3377236 - 337787723018.0
sh3 domain-containing proteinSAMN02745223_03232Not AvailablePositive3378036 - 337860820283.1
outer membrane autotransporter barrel domain-containing proteinSAMN02745223_03233Not AvailableNegative3378798 - 338099973491.4

Displaying genes 3221 – 3230 of 4137 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.