Devosia limi DSM 17137

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Devosiaceae

Genus

Devosia

Description

Devosia limi DSM 17137 is a Gram-negative, non-motile bacterium characterized by its rod shape. This species is aerobic, requiring oxygen for growth, and thrives optimally at a temperature of 29°C, situating it within the mesophilic temperature range. Devosia limi is notable for its single replicon, indicating a streamlined genomic structure which may contribute to its adaptability in various environments. It is also classified as non-spore-forming, suggesting a reliance on other survival strategies in adverse conditions, rather than entering a dormant spore state. The growth preferences and physiological traits of Devosia limi reflect its ecological niche, potentially influencing its interactions with other microorganisms in its habitat. Its aerobic metabolism and temperature preferences may be indicative of its role in nutrient cycling and decomposition within soil or aquatic ecosystems, where it could participate in the breakdown of organic matter and contribute to the overall microbial diversity. Further studies on its ecological roles could elucidate its significance in specific biogeochemical processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyDevosiaceae
GenusDevosia
SpeciesDevosia limi
StrainDSM 17137

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Devosia limi DSM 17137 genome assembly, contig:

Gene Summary

Adenine Count

798843 bp

Thymine Count

803222 bp

Guanine Count

1343591 bp

Cytosine Count

1351571 bp

Genome Length

4297655 bp

Protein-coding Genes

4048 genes

Non-Coding Genes

89 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
two-component system, ntrc family, nitrogen regulation response regulator glngSAMN02745223_02834Not AvailablePositive2976798 - 297824353317.5
two-component system, ntrc family, nitrogen regulation sensor histidine kinase ntrySAMN02745223_02835Not AvailablePositive2978546 - 298084384703.0
two-component system, ntrc family, nitrogen regulation response regulator ntrxSAMN02745223_02836Not AvailablePositive2980843 - 298222550783.3
host factor-i proteinSAMN02745223_02837Not AvailablePositive2982413 - 29826649514.46
gtp-binding protein hflxSAMN02745223_02838Not AvailablePositive2982673 - 298405250079.4
single-strand binding proteinSAMN02745223_02839Not AvailablePositive2984310 - 298481917845.6
methyl-accepting chemotaxis proteinSAMN02745223_02840Not AvailablePositive2985095 - 298680161338.1
marr family proteinSAMN02745223_02841Not AvailablePositive2987040 - 298754618628.0
rnd family efflux transporter, mfp subunitSAMN02745223_02842Not AvailablePositive2987536 - 298873842163.6
hydrophobic/amphiphilic exporter-1, hae1 familySAMN02745223_02843Not AvailablePositive2988739 - 2991870111002.0

Displaying genes 2831 – 2840 of 4137 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.