Devosia limi DSM 17137

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Devosiaceae

Genus

Devosia

Description

Devosia limi DSM 17137 is a Gram-negative, non-motile bacterium characterized by its rod shape. This species is aerobic, requiring oxygen for growth, and thrives optimally at a temperature of 29°C, situating it within the mesophilic temperature range. Devosia limi is notable for its single replicon, indicating a streamlined genomic structure which may contribute to its adaptability in various environments. It is also classified as non-spore-forming, suggesting a reliance on other survival strategies in adverse conditions, rather than entering a dormant spore state. The growth preferences and physiological traits of Devosia limi reflect its ecological niche, potentially influencing its interactions with other microorganisms in its habitat. Its aerobic metabolism and temperature preferences may be indicative of its role in nutrient cycling and decomposition within soil or aquatic ecosystems, where it could participate in the breakdown of organic matter and contribute to the overall microbial diversity. Further studies on its ecological roles could elucidate its significance in specific biogeochemical processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyDevosiaceae
GenusDevosia
SpeciesDevosia limi
StrainDSM 17137

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Devosia limi DSM 17137 genome assembly, contig:

Gene Summary

Adenine Count

798843 bp

Thymine Count

803222 bp

Guanine Count

1343591 bp

Cytosine Count

1351571 bp

Genome Length

4297655 bp

Protein-coding Genes

4048 genes

Non-Coding Genes

89 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-keto-3-deoxygluconate kinaseSAMN02745223_02592Not AvailablePositive2717461 - 271837232506.7
uncharacterized conserved protein, duf924 familySAMN02745223_02593Not AvailableNegative2718437 - 271897920632.5
catechol 2,3-dioxygenaseSAMN02745223_02594Not AvailableNegative2719022 - 271994233010.8
atp-binding cassette, subfamily bSAMN02745223_02595Not AvailableNegative2720232 - 272204065516.3
aminopeptidaseSAMN02745223_02596Not AvailablePositive2722857 - 272409844798.8
pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (e3) componentSAMN02745223_02597Not AvailablePositive2724172 - 272555148708.9
sugar phosphate isomerase/epimeraseSAMN02745223_02598Not AvailableNegative2725571 - 272639829973.2
predicted metal-dependent hydrolase, tim-barrel foldSAMN02745223_02599Not AvailableNegative2726510 - 272733130724.8
transcriptional regulator, iclr familySAMN02745223_02600Not AvailableNegative2727339 - 272814229667.9
2-keto-3-deoxy-l-fuconate dehydrogenaseSAMN02745223_02601Not AvailablePositive2728258 - 272900726242.6

Displaying genes 2591 – 2600 of 4137 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.