Devosia limi DSM 17137

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Devosiaceae

Genus

Devosia

Description

Devosia limi DSM 17137 is a Gram-negative, non-motile bacterium characterized by its rod shape. This species is aerobic, requiring oxygen for growth, and thrives optimally at a temperature of 29°C, situating it within the mesophilic temperature range. Devosia limi is notable for its single replicon, indicating a streamlined genomic structure which may contribute to its adaptability in various environments. It is also classified as non-spore-forming, suggesting a reliance on other survival strategies in adverse conditions, rather than entering a dormant spore state. The growth preferences and physiological traits of Devosia limi reflect its ecological niche, potentially influencing its interactions with other microorganisms in its habitat. Its aerobic metabolism and temperature preferences may be indicative of its role in nutrient cycling and decomposition within soil or aquatic ecosystems, where it could participate in the breakdown of organic matter and contribute to the overall microbial diversity. Further studies on its ecological roles could elucidate its significance in specific biogeochemical processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyDevosiaceae
GenusDevosia
SpeciesDevosia limi
StrainDSM 17137

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Devosia limi DSM 17137 genome assembly, contig:

Gene Summary

Adenine Count

798843 bp

Thymine Count

803222 bp

Guanine Count

1343591 bp

Cytosine Count

1351571 bp

Genome Length

4297655 bp

Protein-coding Genes

4048 genes

Non-Coding Genes

89 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sugar phosphate isomerase/epimeraseSAMN02745223_02121Not AvailableNegative2189409 - 219023629911.1
protein of unknown functionSAMN02745223_02122Not AvailableNegative2190382 - 219155142302.5
predicted dehydrogenaseSAMN02745223_02123Not AvailableNegative2191705 - 219282941890.6
hypothetical proteinSAMN02745223_02124Not AvailableNegative2192976 - 219371625730.1
tripartite-type tricarboxylate transporter, receptor component tctcSAMN02745223_02125Not AvailablePositive2193938 - 219497235952.5
tripartite tricarboxylate transporter tctb family proteinSAMN02745223_02126Not AvailablePositive2195033 - 219557819224.1
putative tricarboxylic transport membrane proteinSAMN02745223_02127Not AvailablePositive2195593 - 219711352707.6
transcriptional regulator, tetr familySAMN02745223_02128Not AvailablePositive2197067 - 219775625626.8
dna-binding transcriptional regulator, lysr familySAMN02745223_02129Not AvailableNegative2197763 - 219868934293.9
carbohydrate abc transporter substrate-binding protein, cut1 family (tc 3.a.1.1.-)SAMN02745223_02130Not AvailablePositive2199182 - 220048045797.2

Displaying genes 2121 – 2130 of 4137 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.