Devosia limi DSM 17137

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Devosiaceae

Genus

Devosia

Description

Devosia limi DSM 17137 is a Gram-negative, non-motile bacterium characterized by its rod shape. This species is aerobic, requiring oxygen for growth, and thrives optimally at a temperature of 29°C, situating it within the mesophilic temperature range. Devosia limi is notable for its single replicon, indicating a streamlined genomic structure which may contribute to its adaptability in various environments. It is also classified as non-spore-forming, suggesting a reliance on other survival strategies in adverse conditions, rather than entering a dormant spore state. The growth preferences and physiological traits of Devosia limi reflect its ecological niche, potentially influencing its interactions with other microorganisms in its habitat. Its aerobic metabolism and temperature preferences may be indicative of its role in nutrient cycling and decomposition within soil or aquatic ecosystems, where it could participate in the breakdown of organic matter and contribute to the overall microbial diversity. Further studies on its ecological roles could elucidate its significance in specific biogeochemical processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyDevosiaceae
GenusDevosia
SpeciesDevosia limi
StrainDSM 17137

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Devosia limi DSM 17137 genome assembly, contig:

Gene Summary

Adenine Count

798843 bp

Thymine Count

803222 bp

Guanine Count

1343591 bp

Cytosine Count

1351571 bp

Genome Length

4297655 bp

Protein-coding Genes

4048 genes

Non-Coding Genes

89 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
16s rrna (guanine527-n7)-methyltransferaseSAMN02745223_01961Not AvailableNegative2034673 - 203532024110.8
trna uridine 5-carboxymethylaminomethyl modification enzymeSAMN02745223_01962Not AvailableNegative2035320 - 203718266543.6
trna modification gtpaseSAMN02745223_01963Not AvailableNegative2037298 - 203859646191.2
transcription termination factor rhoSAMN02745223_01964Not AvailableNegative2038650 - 203991547103.9
putative membrane proteinSAMN02745223_01965Not AvailableNegative2040192 - 204061415957.1
uroporphyrinogen decarboxylaseSAMN02745223_01966Not AvailableNegative2040651 - 204168537378.4
septum formation proteinSAMN02745223_01967Not AvailablePositive2042100 - 204274722610.0
shikimate dehydrogenaseSAMN02745223_01968Not AvailablePositive2042744 - 204357428797.7
dephospho-coa kinaseSAMN02745223_01969Not AvailablePositive2043577 - 204417321146.6
dna polymerase-3 subunit epsilonSAMN02745223_01970Not AvailablePositive2044170 - 204486825015.0

Displaying genes 1961 – 1970 of 4137 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.