Devosia limi DSM 17137

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Devosiaceae

Genus

Devosia

Description

Devosia limi DSM 17137 is a Gram-negative, non-motile bacterium characterized by its rod shape. This species is aerobic, requiring oxygen for growth, and thrives optimally at a temperature of 29°C, situating it within the mesophilic temperature range. Devosia limi is notable for its single replicon, indicating a streamlined genomic structure which may contribute to its adaptability in various environments. It is also classified as non-spore-forming, suggesting a reliance on other survival strategies in adverse conditions, rather than entering a dormant spore state. The growth preferences and physiological traits of Devosia limi reflect its ecological niche, potentially influencing its interactions with other microorganisms in its habitat. Its aerobic metabolism and temperature preferences may be indicative of its role in nutrient cycling and decomposition within soil or aquatic ecosystems, where it could participate in the breakdown of organic matter and contribute to the overall microbial diversity. Further studies on its ecological roles could elucidate its significance in specific biogeochemical processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyDevosiaceae
GenusDevosia
SpeciesDevosia limi
StrainDSM 17137

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Devosia limi DSM 17137 genome assembly, contig:

Gene Summary

Adenine Count

798843 bp

Thymine Count

803222 bp

Guanine Count

1343591 bp

Cytosine Count

1351571 bp

Genome Length

4297655 bp

Protein-coding Genes

4048 genes

Non-Coding Genes

89 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
regulator of nucleoside diphosphate kinaseSAMN02745223_01870Not AvailableNegative1943124 - 194350414172.3
glutamate dehydrogenase (nadp+)SAMN02745223_01871Not AvailablePositive1943777 - 194504245666.7
tricorn proteaseSAMN02745223_01872Not AvailableNegative1945109 - 1948354117222.0
3-isopropylmalate dehydrogenaseSAMN02745223_01873Not AvailablePositive1948565 - 194966539271.2
hypothetical proteinSAMN02745223_01874Not AvailablePositive1949838 - 195013711105.9
predicted zn-dependent protease, minimal metalloprotease (mmp)-like domainSAMN02745223_01875Not AvailableNegative1950306 - 195073115330.8
3-isopropylmalate/(r)-2-methylmalate dehydratase large subunitSAMN02745223_01876Not AvailableNegative1950722 - 195212850734.4
membrane protein involved in the export of o-antigen and teichoic acidSAMN02745223_01877Not AvailableNegative1952236 - 195360047788.4
phosphoribosylaminoimidazolecarboxamide formyltransferase / imp cyclohydrolaseSAMN02745223_01878Not AvailableNegative1953910 - 195549654908.6
diguanylate cyclase (ggdef) domain-containing proteinSAMN02745223_01879Not AvailableNegative1955583 - 195701950143.7

Displaying genes 1871 – 1880 of 4137 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.