Devosia limi DSM 17137

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Devosiaceae

Genus

Devosia

Description

Devosia limi DSM 17137 is a Gram-negative, non-motile bacterium characterized by its rod shape. This species is aerobic, requiring oxygen for growth, and thrives optimally at a temperature of 29°C, situating it within the mesophilic temperature range. Devosia limi is notable for its single replicon, indicating a streamlined genomic structure which may contribute to its adaptability in various environments. It is also classified as non-spore-forming, suggesting a reliance on other survival strategies in adverse conditions, rather than entering a dormant spore state. The growth preferences and physiological traits of Devosia limi reflect its ecological niche, potentially influencing its interactions with other microorganisms in its habitat. Its aerobic metabolism and temperature preferences may be indicative of its role in nutrient cycling and decomposition within soil or aquatic ecosystems, where it could participate in the breakdown of organic matter and contribute to the overall microbial diversity. Further studies on its ecological roles could elucidate its significance in specific biogeochemical processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyDevosiaceae
GenusDevosia
SpeciesDevosia limi
StrainDSM 17137

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Devosia limi DSM 17137 genome assembly, contig:

Gene Summary

Adenine Count

798843 bp

Thymine Count

803222 bp

Guanine Count

1343591 bp

Cytosine Count

1351571 bp

Genome Length

4297655 bp

Protein-coding Genes

4048 genes

Non-Coding Genes

89 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alpha-d-ribose 1-methylphosphonate 5-triphosphate diphosphataseSAMN02745223_01098Not AvailablePositive1156463 - 115761140668.6
ribose 1,5-bisphosphokinaseSAMN02745223_01099Not AvailablePositive1157608 - 115817120092.8
gntr family transcriptional regulator, phosphonate transport system regulatory proteinSAMN02745223_01100Not AvailableNegative1158199 - 115892426216.4
alpha-d-ribose 1-methylphosphonate 5-triphosphate synthase subunit phngSAMN02745223_01101Not AvailablePositive1159001 - 115945615931.8
alpha-d-ribose 1-methylphosphonate 5-triphosphate synthase subunit phnhSAMN02745223_01102Not AvailablePositive1159456 - 116005220726.8
alpha-d-ribose 1-methylphosphonate 5-triphosphate synthase subunit phniSAMN02745223_01103Not AvailablePositive1160054 - 116114240067.7
alpha-d-ribose 1-methylphosphonate 5-phosphate c-p lyaseSAMN02745223_01104Not AvailablePositive1161139 - 116202032788.1
hypothetical proteinSAMN02745223_01105Not AvailablePositive1162017 - 11621815974.24
putative phosphonate transport system atp-binding proteinSAMN02745223_01106Not AvailablePositive1162174 - 116294728642.6
alpha-d-ribose 1-methylphosphonate 5-triphosphate synthase subunit phnlSAMN02745223_01107Not AvailablePositive1163114 - 116381525062.4

Displaying genes 1141 – 1150 of 4137 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.