Halodesulfovibrio marinisediminis DSM 17456

curved/spiral

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfovibrionia

Order

Desulfovibrionales

Family

Desulfovibrionaceae

Genus

Halodesulfovibrio

Description

Halodesulfovibrio marinisediminis DSM 17456 is a mesophilic, curved to spiral-shaped bacterium known for its unique ecological niche. It thrives optimally at a temperature of 37°C, indicating a preference for moderate environmental conditions. This organism is characterized by the presence of flagella, which facilitate motility, allowing it to navigate its aquatic habitat effectively. H. marinisediminis is a non-spore-forming bacterium, which suggests that it relies on other survival strategies rather than sporulation to withstand environmental stresses. This trait can impact its ecological role, as non-spore-forming bacteria often have different survival and growth strategies compared to their spore-forming counterparts. The genome of H. marinisediminis is represented by a single replicon, which is an important aspect of its genetic organization. The reference accession number for its genetic material is FSRG00000000.1, providing a resource for further genomic studies and understanding its metabolic pathways. In summary, Halodesulfovibrio marinisediminis DSM 17456 is a mesophilic, motile bacterium that plays a role in aquatic environments. Its non-spore-forming nature and optimal growth conditions suggest it may be involved in specific biogeochemical processes, potentially influencing nutrient cycling in marine ecosystems. The understanding of such traits is crucial for appreciating the ecological dynamics in which this bacterium participates.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfovibrionia
OrderDesulfovibrionales
FamilyDesulfovibrionaceae
GenusHalodesulfovibrio
SpeciesHalodesulfovibrio marinisediminis
StrainDSM 17456

Profile

Physiology
Gram staining propertiesNot Available
Shapecurved/spiral
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature37
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Desulfovibrio marinisediminis DSM 17456 genome assembly, contig:

Gene Summary

Adenine Count

996652 bp

Thymine Count

1045497 bp

Guanine Count

870341 bp

Cytosine Count

797493 bp

Genome Length

3710653 bp

Protein-coding Genes

3104 genes

Non-Coding Genes

155 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycogen recognition site of amp-activated protein kinaseSAMN02745161_0794Not AvailableNegative825467 - 82609023531.8
rna polymerase sigma-70 factor, ecf subfamilySAMN02745161_0795Not AvailableNegative826087 - 82664420932.0
sigma-b regulation protein rsbu (phosphoserine phosphatase)SAMN02745161_0796Not AvailablePositive826929 - 82897174414.6
l-tartrate/succinate antiporterSAMN02745161_0797Not AvailablePositive829244 - 83065050575.3
signal transduction histidine kinaseSAMN02745161_0798Not AvailablePositive830923 - 834330128692.0
diguanylate cyclase (ggdef) domain-containing proteinSAMN02745161_0799Not AvailablePositive834323 - 83522233715.0
phenazine biosynthesis protein phzf familySAMN02745161_0800Not AvailablePositive835272 - 83605728812.6
multidrug efflux pump subunit acrbSAMN02745161_0801Not AvailableNegative836189 - 839266114526.0
rnd family efflux transporter, mfp subunitSAMN02745161_0802Not AvailableNegative839279 - 84036740309.0
transporter, cpa2 familySAMN02745161_0803Not AvailablePositive840611 - 84226660275.6

Displaying genes 821 – 830 of 3259 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.