Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Halodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Halodesulfovibrio |
| Species | Halodesulfovibrio marinisediminis |
| Strain | DSM 17456 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
996652 bp
Thymine Count
1045497 bp
Guanine Count
870341 bp
Cytosine Count
797493 bp
Genome Length
3710653 bp
Protein-coding Genes
3104 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycogen recognition site of amp-activated protein kinase | SAMN02745161_0794 | Not Available | Negative | 825467 - 826090 | 23531.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN02745161_0795 | Not Available | Negative | 826087 - 826644 | 20932.0 |
| sigma-b regulation protein rsbu (phosphoserine phosphatase) | SAMN02745161_0796 | Not Available | Positive | 826929 - 828971 | 74414.6 |
| l-tartrate/succinate antiporter | SAMN02745161_0797 | Not Available | Positive | 829244 - 830650 | 50575.3 |
| signal transduction histidine kinase | SAMN02745161_0798 | Not Available | Positive | 830923 - 834330 | 128692.0 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN02745161_0799 | Not Available | Positive | 834323 - 835222 | 33715.0 |
| phenazine biosynthesis protein phzf family | SAMN02745161_0800 | Not Available | Positive | 835272 - 836057 | 28812.6 |
| multidrug efflux pump subunit acrb | SAMN02745161_0801 | Not Available | Negative | 836189 - 839266 | 114526.0 |
| rnd family efflux transporter, mfp subunit | SAMN02745161_0802 | Not Available | Negative | 839279 - 840367 | 40309.0 |
| transporter, cpa2 family | SAMN02745161_0803 | Not Available | Positive | 840611 - 842266 | 60275.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

