Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Halodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Halodesulfovibrio |
| Species | Halodesulfovibrio marinisediminis |
| Strain | DSM 17456 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
996652 bp
Thymine Count
1045497 bp
Guanine Count
870341 bp
Cytosine Count
797493 bp
Genome Length
3710653 bp
Protein-coding Genes
3104 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formylglycine-generating enzyme, required for sulfatase activity, contains sumf1/fge domain | SAMN02745161_3284 | Not Available | Positive | 3655709 - 3658489 | 106254.0 |
| ankyrin repeat | SAMN02745161_3285 | Not Available | Positive | 3658514 - 3660154 | 60687.0 |
| hypothetical protein | SAMN02745161_3287 | Not Available | Positive | 3661047 - 3667184 | 233784.0 |
| tir domain-containing protein | SAMN02745161_3288 | Not Available | Positive | 3667583 - 3668887 | 48929.4 |
| dna topoisomerase-3 | SAMN02745161_3289 | Not Available | Negative | 3668940 - 3671036 | 77332.7 |
| antirestriction protein ardc | SAMN02745161_3290 | Not Available | Negative | 3671108 - 3673216 | 78953.6 |
| hypothetical protein | SAMN02745161_3291 | Not Available | Negative | 3673223 - 3673435 | 7964.32 |
| conjugative transfer signal peptidase traf | SAMN02745161_3292 | Not Available | Negative | 3673448 - 3673960 | 18709.7 |
| type iv secretion system protein vird4 | SAMN02745161_3293 | Not Available | Negative | 3673951 - 3675510 | 57319.8 |
| ribonucleoside-diphosphate reductase class ii | SAMN02745161_3297 | Not Available | Negative | 3675957 - 3678194 | 82721.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

