Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Halodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Halodesulfovibrio |
| Species | Halodesulfovibrio marinisediminis |
| Strain | DSM 17456 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
996652 bp
Thymine Count
1045497 bp
Guanine Count
870341 bp
Cytosine Count
797493 bp
Genome Length
3710653 bp
Protein-coding Genes
3104 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02745161_2955 | Not Available | Positive | 3304533 - 3304787 | 9476.31 |
| guanylate kinase | SAMN02745161_2956 | Not Available | Positive | 3304787 - 3305446 | 24964.3 |
| orotidine-5'-phosphate decarboxylase | SAMN02745161_2957 | Not Available | Positive | 3305448 - 3306143 | 24524.0 |
| tetratricopeptide repeat-containing protein | SAMN02745161_2958 | Not Available | Positive | 3306177 - 3307121 | 35937.1 |
| exonuclease recj | SAMN02745161_2959 | Not Available | Positive | 3307238 - 3308947 | 62583.9 |
| uncharacterized protein tigr03905 | SAMN02745161_2960 | Not Available | Negative | 3309059 - 3309358 | 10487.6 |
| dna-nicking endonuclease, smr domain | SAMN02745161_2961 | Not Available | Positive | 3309469 - 3310392 | 34359.0 |
| pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing protein | SAMN02745161_2962 | Not Available | Negative | 3310438 - 3312057 | 61218.1 |
| hypothetical protein | SAMN02745161_2963 | Not Available | Negative | 3312178 - 3312645 | 17945.5 |
| tetratricopeptide repeat-containing protein | SAMN02745161_2964 | Not Available | Positive | 3312762 - 3313343 | 21007.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

