Halodesulfovibrio marinisediminis DSM 17456

curved/spiral

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfovibrionia

Order

Desulfovibrionales

Family

Desulfovibrionaceae

Genus

Halodesulfovibrio

Description

Halodesulfovibrio marinisediminis DSM 17456 is a mesophilic, curved to spiral-shaped bacterium known for its unique ecological niche. It thrives optimally at a temperature of 37°C, indicating a preference for moderate environmental conditions. This organism is characterized by the presence of flagella, which facilitate motility, allowing it to navigate its aquatic habitat effectively. H. marinisediminis is a non-spore-forming bacterium, which suggests that it relies on other survival strategies rather than sporulation to withstand environmental stresses. This trait can impact its ecological role, as non-spore-forming bacteria often have different survival and growth strategies compared to their spore-forming counterparts. The genome of H. marinisediminis is represented by a single replicon, which is an important aspect of its genetic organization. The reference accession number for its genetic material is FSRG00000000.1, providing a resource for further genomic studies and understanding its metabolic pathways. In summary, Halodesulfovibrio marinisediminis DSM 17456 is a mesophilic, motile bacterium that plays a role in aquatic environments. Its non-spore-forming nature and optimal growth conditions suggest it may be involved in specific biogeochemical processes, potentially influencing nutrient cycling in marine ecosystems. The understanding of such traits is crucial for appreciating the ecological dynamics in which this bacterium participates.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfovibrionia
OrderDesulfovibrionales
FamilyDesulfovibrionaceae
GenusHalodesulfovibrio
SpeciesHalodesulfovibrio marinisediminis
StrainDSM 17456

Profile

Physiology
Gram staining propertiesNot Available
Shapecurved/spiral
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature37
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Desulfovibrio marinisediminis DSM 17456 genome assembly, contig:

Gene Summary

Adenine Count

996652 bp

Thymine Count

1045497 bp

Guanine Count

870341 bp

Cytosine Count

797493 bp

Genome Length

3710653 bp

Protein-coding Genes

3104 genes

Non-Coding Genes

155 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN02745161_2884Not AvailablePositive3229322 - 322958810527.2
diguanylate cyclase (ggdef) domain-containing proteinSAMN02745161_2885Not AvailablePositive3229819 - 323144161076.8
formate-dependent phosphoribosylglycinamide formyltransferaseSAMN02745161_2886Not AvailablePositive3231669 - 323285042166.5
nucleotide-binding universal stress protein, uspa familySAMN02745161_2887Not AvailableNegative3232959 - 323345918628.2
hypothetical proteinSAMN02745161_2888Not AvailableNegative3233456 - 323443938241.6
uncharacterized conserved protein, duf1499 familySAMN02745161_2889Not AvailableNegative3234475 - 323492117035.2
amino acid abc transporter membrane protein 1, paat family /amino acid abc transporter membrane protein 2, paat familySAMN02745161_2890Not AvailableNegative3235192 - 323697666594.1
amino acid abc transporter substrate-binding protein, paat familySAMN02745161_2891Not AvailableNegative3237100 - 323792430531.8
amino acid abc transporter atp-binding protein, paat familySAMN02745161_2892Not AvailableNegative3238017 - 323874827512.5
hypothetical proteinSAMN02745161_2893Not AvailablePositive3239150 - 323990226605.2

Displaying genes 2841 – 2850 of 3259 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.