Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Halodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Halodesulfovibrio |
| Species | Halodesulfovibrio marinisediminis |
| Strain | DSM 17456 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
996652 bp
Thymine Count
1045497 bp
Guanine Count
870341 bp
Cytosine Count
797493 bp
Genome Length
3710653 bp
Protein-coding Genes
3104 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide-methionine (s)-s-oxide reductase | SAMN02745161_2687 | Not Available | Positive | 2999912 - 3000520 | 23022.4 |
| nyn domain-containing protein | SAMN02745161_2688 | Not Available | Negative | 3000610 - 3001890 | 49416.5 |
| excinuclease abc subunit a | SAMN02745161_2689 | Not Available | Negative | 3001983 - 3004754 | 101930.0 |
| Trna-leu | Not Available | Not Available | Positive | 3005001 - 3005087 | Not Available |
| restriction endonuclease | SAMN02745161_2691 | Not Available | Negative | 3005190 - 3006074 | 34089.2 |
| fic/doc family protein | SAMN02745161_2692 | Not Available | Positive | 3006290 - 3007024 | 27869.6 |
| hypothetical protein | SAMN02745161_2693 | Not Available | Negative | 3007585 - 3007971 | 14619.0 |
| protein of unknown function | SAMN02745161_2694 | Not Available | Negative | 3008196 - 3008792 | 22944.2 |
| hypothetical protein | SAMN02745161_2695 | Not Available | Negative | 3009140 - 3009472 | 10758.1 |
| von willebrand factor type a domain-containing protein | SAMN02745161_2696 | Not Available | Negative | 3009543 - 3011102 | 57417.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

