Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Halodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Halodesulfovibrio |
| Species | Halodesulfovibrio marinisediminis |
| Strain | DSM 17456 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
996652 bp
Thymine Count
1045497 bp
Guanine Count
870341 bp
Cytosine Count
797493 bp
Genome Length
3710653 bp
Protein-coding Genes
3104 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-type amino acid transport substrate-binding protein | SAMN02745161_2647 | Not Available | Negative | 2952903 - 2953631 | 28050.7 |
| membrane associated serine protease, rhomboid family | SAMN02745161_2648 | Not Available | Positive | 2954097 - 2954864 | 28755.0 |
| fe-s cluster assembly atp-binding protein | SAMN02745161_2649 | Not Available | Positive | 2955003 - 2955800 | 29331.4 |
| hypothetical protein | SAMN02745161_2650 | Not Available | Positive | 2955803 - 2956963 | 42238.1 |
| hypothetical protein | SAMN02745161_2651 | Not Available | Positive | 2957265 - 2957714 | 16972.2 |
| nadph:quinone reductase | SAMN02745161_2652 | Not Available | Negative | 2957994 - 2958962 | 35970.2 |
| predicted component of the ribosome quality control (rqc) complex, yloa/tae2 family, contains fibronectin-binding (fbpa) and duf814 domains | SAMN02745161_2653 | Not Available | Negative | 2959071 - 2960669 | 60092.6 |
| transcriptional regulator, trar/dksa family | SAMN02745161_2654 | Not Available | Negative | 2960676 - 2961038 | 13759.1 |
| Trna-gly | Not Available | Not Available | Positive | 2961557 - 2961631 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 2962042 - 2962116 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

