Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Halodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Halodesulfovibrio |
| Species | Halodesulfovibrio marinisediminis |
| Strain | DSM 17456 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
996652 bp
Thymine Count
1045497 bp
Guanine Count
870341 bp
Cytosine Count
797493 bp
Genome Length
3710653 bp
Protein-coding Genes
3104 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-b regulation protein rsbu (phosphoserine phosphatase) | SAMN02745161_2554 | Not Available | Positive | 2842432 - 2844447 | 73551.9 |
| dna-binding transcriptional response regulator, ntrc family, contains rec, aaa-type atpase, and a fis-type dna-binding domains | SAMN02745161_2555 | Not Available | Positive | 2844459 - 2845799 | 50328.5 |
| anti-sigma regulatory factor (ser/thr protein kinase) | SAMN02745161_2556 | Not Available | Negative | 2845806 - 2846207 | 15306.4 |
| tir chaperone protein (cest) family protein | SAMN02745161_2557 | Not Available | Positive | 2847613 - 2848080 | 17189.5 |
| hypothetical protein | SAMN02745161_2558 | Not Available | Positive | 2848098 - 2850200 | 76492.7 |
| tir chaperone protein (cest) family protein | SAMN02745161_2559 | Not Available | Positive | 2850687 - 2851154 | 17258.6 |
| hypothetical protein | SAMN02745161_2560 | Not Available | Positive | 2851266 - 2855864 | 169483.0 |
| putative transposase | SAMN02745161_2561 | Not Available | Positive | 2856159 - 2856425 | 10323.7 |
| methyl-accepting chemotaxis sensory transducer with cache sensor | SAMN02745161_2563 | Not Available | Positive | 2857750 - 2859876 | 76872.4 |
| pas domain s-box-containing protein | SAMN02745161_2564 | Not Available | Positive | 2860427 - 2861794 | 51627.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

