Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Halodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Halodesulfovibrio |
| Species | Halodesulfovibrio marinisediminis |
| Strain | DSM 17456 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
996652 bp
Thymine Count
1045497 bp
Guanine Count
870341 bp
Cytosine Count
797493 bp
Genome Length
3710653 bp
Protein-coding Genes
3104 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system major needle protein, yscf/mxih/prgi family | SAMN02745161_2534 | Not Available | Negative | 2826082 - 2826315 | 8435.23 |
| hypothetical protein | SAMN02745161_2535 | Not Available | Negative | 2826306 - 2826554 | 9349.97 |
| type iii secretion apparatus protein, yscd/hrpq family | SAMN02745161_2536 | Not Available | Negative | 2826569 - 2827972 | 50699.1 |
| type iii secretion protein c | SAMN02745161_2537 | Not Available | Negative | 2827981 - 2829837 | 67390.1 |
| hypothetical protein | SAMN02745161_2538 | Not Available | Negative | 2829949 - 2830377 | 15874.9 |
| type iii secretion system translocon protein, yopd/ipac/espb family | SAMN02745161_2539 | Not Available | Negative | 2830395 - 2831264 | 31247.6 |
| secretion system effector c (ssec) like family protein | SAMN02745161_2540 | Not Available | Negative | 2831306 - 2832388 | 36395.4 |
| type iii secretion low calcium response chaperone lcrh/sycd | SAMN02745161_2541 | Not Available | Negative | 2832393 - 2832896 | 18380.8 |
| hypothetical protein | SAMN02745161_2542 | Not Available | Negative | 2832906 - 2833505 | 21956.5 |
| hypothetical protein | SAMN02745161_2543 | Not Available | Negative | 2833595 - 2834212 | 22761.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

