Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Halodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Halodesulfovibrio |
| Species | Halodesulfovibrio marinisediminis |
| Strain | DSM 17456 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
996652 bp
Thymine Count
1045497 bp
Guanine Count
870341 bp
Cytosine Count
797493 bp
Genome Length
3710653 bp
Protein-coding Genes
3104 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein tyrosine phosphatase | SAMN02745161_2513 | Not Available | Negative | 2806963 - 2808612 | 59380.6 |
| tir chaperone protein (cest) family protein | SAMN02745161_2514 | Not Available | Negative | 2808753 - 2809214 | 17020.2 |
| hypothetical protein | SAMN02745161_2515 | Not Available | Negative | 2809225 - 2811687 | 88602.2 |
| type iii secretion protein u | SAMN02745161_2516 | Not Available | Negative | 2811888 - 2812922 | 38718.8 |
| type iii secretion protein t | SAMN02745161_2517 | Not Available | Negative | 2812925 - 2813752 | 30623.4 |
| type iii secretion protein s | SAMN02745161_2518 | Not Available | Negative | 2813790 - 2814062 | 9749.26 |
| type iii secretion protein v | SAMN02745161_2519 | Not Available | Negative | 2814074 - 2816185 | 76993.7 |
| hypothetical protein | SAMN02745161_2520 | Not Available | Negative | 2816185 - 2816523 | 12728.6 |
| type iii secretion system yscx (type_iii_yscx) | SAMN02745161_2521 | Not Available | Negative | 2816531 - 2816905 | 13587.1 |
| hypothetical protein | SAMN02745161_2522 | Not Available | Negative | 2816920 - 2817318 | 14824.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

