Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Halodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Halodesulfovibrio |
| Species | Halodesulfovibrio marinisediminis |
| Strain | DSM 17456 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
996652 bp
Thymine Count
1045497 bp
Guanine Count
870341 bp
Cytosine Count
797493 bp
Genome Length
3710653 bp
Protein-coding Genes
3104 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-b regulation protein rsbu (phosphoserine phosphatase) | SAMN02745161_2099 | Not Available | Positive | 2331743 - 2334016 | 85241.7 |
| serine/threonine-protein kinase rsbw | SAMN02745161_2100 | Not Available | Positive | 2334009 - 2334449 | 16732.3 |
| anti-sigma b factor antagonist | SAMN02745161_2101 | Not Available | Positive | 2334463 - 2334795 | 12215.6 |
| molybdopterin-guanine dinucleotide biosynthesis protein b | SAMN02745161_2102 | Not Available | Negative | 2334999 - 2335712 | 25353.0 |
| formate dehydrogenase iron-sulfur subunit | SAMN02745161_2103 | Not Available | Negative | 2336088 - 2336798 | 26515.8 |
| formate dehydrogenase major subunit | SAMN02745161_2104 | Not Available | Negative | 2336802 - 2339216 | 89898.9 |
| formate dehydrogenase major subunit | SAMN02745161_2105 | Not Available | Negative | 2339265 - 2339840 | 20765.8 |
| hypothetical protein | SAMN02745161_2106 | Not Available | Negative | 2339866 - 2340096 | 8519.42 |
| transposase | SAMN02745161_2107 | Not Available | Negative | 2340362 - 2341237 | 33430.0 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN02745161_2108 | Not Available | Positive | 2341475 - 2342722 | 45285.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

